Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav13-1A0A075B644 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav13-1A0A075B644 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13-1A0A075B644 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav13-1A0A075B644 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13-1A0A075B644 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13-1A0A075B644 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13-1A0A075B644 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13-1A0A075B644 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13-1A0A075B644 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13-1A0A075B644 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13-1A0A075B644 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
Trav13-1A0A075B644 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav13-1A0A075B644 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav13-1A0A075B644 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13-1A0A075B644 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13-1A0A075B644 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13-1A0A075B644 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13-1A0A075B644 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trav13-1A0A075B644 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-1A0A075B644 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.59■□□□□ 0.25
Trav13-1A0A075B644 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-1A0A075B644 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-1A0A075B644 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-1A0A075B644 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-1A0A075B644 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-1A0A075B644 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13-1A0A075B644 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13-1A0A075B644 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13-1A0A075B644 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13-1A0A075B644 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13-1A0A075B644 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav13-1A0A075B644 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13-1A0A075B644 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13-1A0A075B644 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13-1A0A075B644 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.55■□□□□ 0.24
Trav13-1A0A075B644 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.55■□□□□ 0.24
Trav13-1A0A075B644 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13-1A0A075B644 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13-1A0A075B644 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav13-1A0A075B644 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-1A0A075B644 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-1A0A075B644 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-1A0A075B644 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-1A0A075B644 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trav13-1A0A075B644 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Trav13-1A0A075B644 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav13-1A0A075B644 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav13-1A0A075B644 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13-1A0A075B644 Particl-201ENSMUST00000205370 1560 ntBASIC16.52■□□□□ 0.24
Trav13-1A0A075B644 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13-1A0A075B644 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13-1A0A075B644 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav13-1A0A075B644 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13-1A0A075B644 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav13-1A0A075B644 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13-1A0A075B644 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-1A0A075B644 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav13-1A0A075B644 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.5■□□□□ 0.23
Trav13-1A0A075B644 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-1A0A075B644 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-1A0A075B644 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.5■□□□□ 0.23
Trav13-1A0A075B644 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Trav13-1A0A075B644 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13-1A0A075B644 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13-1A0A075B644 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13-1A0A075B644 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav13-1A0A075B644 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13-1A0A075B644 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav13-1A0A075B644 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13-1A0A075B644 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav13-1A0A075B644 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13-1A0A075B644 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13-1A0A075B644 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav13-1A0A075B644 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav13-1A0A075B644 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13-1A0A075B644 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13-1A0A075B644 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav13-1A0A075B644 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13-1A0A075B644 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav13-1A0A075B644 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav13-1A0A075B644 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13-1A0A075B644 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav13-1A0A075B644 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Trav13-1A0A075B644 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav13-1A0A075B644 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13-1A0A075B644 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-1A0A075B644 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-1A0A075B644 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-1A0A075B644 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-1A0A075B644 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-1A0A075B644 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-1A0A075B644 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trav13-1A0A075B644 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-1A0A075B644 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-1A0A075B644 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-1A0A075B644 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav13-1A0A075B644 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav13-1A0A075B644 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13-1A0A075B644 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms