Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AK4P6-201ENST00000505168 528 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 AC084824.1-201ENST00000550917 1005 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 BNIP3P5-201ENST00000562290 498 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 AC108751.5-201ENST00000492880 1336 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 CASC19-206ENST00000641028 1430 ntBASIC5.96□□□□□ -1.45
SCN11AQ9UI33 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SCN11AQ9UI33 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SCN11AQ9UI33 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.96□□□□□ -1.45
SCN11AQ9UI33 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SCN11AQ9UI33 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.96□□□□□ -1.45
SCN11AQ9UI33 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
SCN11AQ9UI33 RNA5SP28-201ENST00000363841 119 ntBASIC5.96□□□□□ -1.46
SCN11AQ9UI33 SNORA5.1-201ENST00000384275 131 ntBASIC5.96□□□□□ -1.46
SCN11AQ9UI33 AL050305.1-201ENST00000399993 1230 ntBASIC5.96□□□□□ -1.46
SCN11AQ9UI33 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.96□□□□□ -1.46
SCN11AQ9UI33 AC073073.1-201ENST00000493920 463 ntBASIC5.96□□□□□ -1.46
SCN11AQ9UI33 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN11AQ9UI33 AL133243.1-201ENST00000614487 366 ntBASIC5.96□□□□□ -1.46
SCN11AQ9UI33 OR8G7P-201ENST00000616658 848 ntBASIC5.96□□□□□ -1.46
SCN11AQ9UI33 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN11AQ9UI33 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN11AQ9UI33 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN11AQ9UI33 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SCN11AQ9UI33 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
SCN11AQ9UI33 AL391684.1-202ENST00000641293 1636 ntBASIC5.96□□□□□ -1.46
SCN11AQ9UI33 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN11AQ9UI33 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN11AQ9UI33 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 H2AFZP5-201ENST00000446960 382 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AC127024.5-201ENST00000580085 462 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AC023575.1-201ENST00000580510 358 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 BNIP3P33-201ENST00000598912 569 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AL139041.1-201ENST00000605480 610 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AL161637.1-201ENST00000622380 412 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AP001153.1-201ENST00000641024 338 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 LINC00622-201ENST00000562811 1570 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 RN7SKP227-201ENST00000364445 330 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AL359073.1-201ENST00000448036 403 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 RN7SL98P-201ENST00000462271 300 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AC128716.1-201ENST00000475129 166 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 RNA5SP464-201ENST00000516251 108 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 MRPL49P2-201ENST00000521066 465 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 CPHL1P-201ENST00000461341 3407 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 UGT2B26P-201ENST00000508672 1613 ntBASIC5.95□□□□□ -1.46
SCN11AQ9UI33 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SCN11AQ9UI33 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 TMBIM7P-201ENST00000418074 855 ntBASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AC020890.1-201ENST00000491837 504 ntBASIC5.94□□□□□ -1.46
SCN11AQ9UI33 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms