Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 HPRT1P1-201ENST00000509498 657 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 AC005868.1-201ENST00000536421 331 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 AC022726.1-201ENST00000587475 207 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 AC010503.3-201ENST00000594355 540 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 AC006453.5-201ENST00000636451 619 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC010132.2-201ENST00000295493 1043 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 U3.35-201ENST00000408405 208 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 DPPA2P2-201ENST00000418220 897 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC092570.3-201ENST00000420113 693 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC245028.1-201ENST00000423259 256 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 RPS26P4-201ENST00000431743 355 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AL359265.2-201ENST00000434367 631 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 CBX1P1-201ENST00000440184 427 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC011005.3-201ENST00000491624 395 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 OR5D2P-201ENST00000524390 911 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 MIR4697-201ENST00000582977 78 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AL049794.2-201ENST00000616301 365 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AL359757.1-201ENST00000623176 255 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 KARSP3-201ENST00000571212 1504 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 RBPJP2-201ENST00000618187 1444 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC105074.1-201ENST00000623380 3095 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC119751.6-201ENST00000416712 186 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 RPS27AP7-201ENST00000422792 455 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 GSTA7P-201ENST00000438425 448 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 NUTF2P7-201ENST00000453086 375 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 FTH1P2-201ENST00000466086 412 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC007016.1-201ENST00000512110 244 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 RNU6-513P-201ENST00000516104 104 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC020937.1-201ENST00000519677 1013 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC004232.3-201ENST00000622977 525 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC011755.1-201ENST00000623763 2049 ntBASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KIAA1549Q9HCM3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 Z98755.1-201ENST00000407015 1384 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 U3.22-201ENST00000391120 215 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 CNOT7P1-201ENST00000429006 852 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 RPL35AP21-201ENST00000437667 333 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC016831.4-201ENST00000438302 307 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC009220.1-201ENST00000451614 275 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 CEACAMP10-202ENST00000495431 496 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC108145.1-201ENST00000503770 153 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms