Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL022393.1-201ENST00000625142 1677 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 AL672167.1-204ENST00000641875 3017 ntBASIC5.26□□□□□ -1.57
PCDH9Q9HC56 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH9Q9HC56 CIR1P2-201ENST00000514821 1342 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 SNORA2.3-201ENST00000383920 135 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AL121878.1-201ENST00000418638 859 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 ELOCP3-201ENST00000439303 348 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 XKRY2-201ENST00000442362 1093 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC007000.2-201ENST00000442564 487 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC004980.3-201ENST00000447046 365 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC009127.1-201ENST00000467090 155 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC079841.1-201ENST00000481228 950 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 OR11I1P-201ENST00000486033 954 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 OR9N1P-202ENST00000494289 481 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 HIGD1AP14-201ENST00000507617 282 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 RPL23AP53-201ENST00000521854 457 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC104072.1-201ENST00000568817 668 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC126365.2-201ENST00000580630 379 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 MIR4472-2-201ENST00000582069 67 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 KATNBL1P5-201ENST00000605015 517 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AL391834.2-201ENST00000609982 546 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 CR589904.2-201ENST00000612533 440 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC016957.2-201ENST00000616998 848 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AC006840.1-201ENST00000623069 542 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 CR382285.2-201ENST00000624662 1495 ntBASIC5.25□□□□□ -1.57
PCDH9Q9HC56 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDH9Q9HC56 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 SNORA17.1-201ENST00000362945 126 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 RNU6-650P-201ENST00000365658 111 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 MIR1182-201ENST00000408363 97 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 NPM1P40-201ENST00000412758 733 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 PTP4A1P1-201ENST00000420539 515 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 CNOT7P2-201ENST00000441051 832 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AL513321.1-201ENST00000441175 761 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 BUD31P2-201ENST00000449374 300 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AL356981.1-201ENST00000454879 684 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC093663.2-201ENST00000484625 313 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC023424.1-201ENST00000496058 459 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 MTCO1P31-201ENST00000506355 492 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 OSBPL9P3-201ENST00000534523 595 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC090022.1-201ENST00000546569 311 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 BNIP3P1-201ENST00000547295 580 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms