Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MTCO2P23-201ENST00000425216 680 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AL512661.1-201ENST00000434586 1253 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC006466.1-201ENST00000438721 289 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 HIGD1AP8-201ENST00000453927 274 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 SNORD125-201ENST00000459538 96 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 RN7SL188P-201ENST00000469842 285 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 TRBV8-1-201ENST00000481590 279 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 RN7SL423P-201ENST00000486202 304 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC105313.1-201ENST00000509121 353 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 GTF2F2P1-201ENST00000511083 675 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC011447.4-201ENST00000587562 111 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AL353662.3-201ENST00000625131 237 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC005005.4-201ENST00000623789 16698 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC026523.2-201ENST00000625039 7739 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.46□□□□□ -1.53
EBF3Q9H4W6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
EBF3Q9H4W6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.46□□□□□ -1.53
EBF3Q9H4W6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 RNA5SP123-201ENST00000363244 119 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 SNORD56.6-201ENST00000384569 71 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 DBIP1-201ENST00000401435 260 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 MTCO2P8-201ENST00000412213 658 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 MTND4LP21-201ENST00000415303 295 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 HSFY4P-201ENST00000415994 1181 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 AC106883.1-201ENST00000418805 562 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 AC013268.2-201ENST00000420753 337 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 RRM2P4-201ENST00000441721 562 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 AC108729.2-201ENST00000476543 840 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 OR9N1P-201ENST00000491296 333 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 ENPP7P11-201ENST00000505915 627 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 MTND4LP31-201ENST00000514859 294 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 EEF1A1P37-201ENST00000522748 715 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 RN7SL356P-201ENST00000582228 248 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 MIR4480-201ENST00000582492 71 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 AC023762.1-201ENST00000603280 584 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 AC005252.1-201ENST00000604518 1063 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 AC009597.2-201ENST00000604659 592 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 ICE2P1-201ENST00000512800 1849 ntBASIC5.46□□□□□ -1.54
EBF3Q9H4W6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
EBF3Q9H4W6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 RNU6-609P-201ENST00000365459 107 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AMZ2P2-201ENST00000406819 1057 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC069282.1-201ENST00000411911 526 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms