Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 RNU4-92P-201ENST00000363783 136 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 RNU2-18P-201ENST00000411224 162 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC092745.2-202ENST00000411880 369 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AL357752.1-201ENST00000412817 349 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 C1DP1-201ENST00000426049 402 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 RPL7P34-201ENST00000433316 712 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC112492.1-201ENST00000449607 712 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 DUTP1-201ENST00000493631 470 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC091860.1-201ENST00000505723 432 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 IMPA1P1-201ENST00000510718 842 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 GAPDHP62-201ENST00000515313 990 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 POLR2KP1-201ENST00000553226 168 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC022884.3-201ENST00000579571 248 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC061975.8-201ENST00000587058 721 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AP001542.2-201ENST00000593141 364 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 VN1R78P-201ENST00000597393 564 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AL020997.3-201ENST00000602843 359 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC079315.1-201ENST00000602952 623 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AL138895.2-201ENST00000603019 178 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC107952.2-201ENST00000606048 486 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC092954.1-201ENST00000609121 445 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC009237.15-201ENST00000610252 501 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC091304.6-201ENST00000619761 202 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AP003485.2-201ENST00000623636 610 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.59□□□□□ -1.52
TRIM54Q9BYV2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM54Q9BYV2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM54Q9BYV2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
TRIM54Q9BYV2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC100871.1-201ENST00000507871 1456 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 MTND4P10-201ENST00000446199 1363 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 RN7SKP145-201ENST00000363291 303 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 MIR130A-201ENST00000385274 89 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 LRRC37BP1-201ENST00000398851 714 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AL049545.1-201ENST00000401856 572 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 FCF1P5-201ENST00000406490 482 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 RN7SKP278-201ENST00000410504 342 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AL022331.1-201ENST00000429025 477 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 RPS6P15-201ENST00000431996 751 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC068135.1-201ENST00000446164 246 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC090602.1-201ENST00000469695 252 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms