Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 NR1H5P-201ENST00000452683 1377 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 NAMPTP1-201ENST00000440465 2514 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AL139128.1-201ENST00000413921 941 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 CHEK2P3-201ENST00000416118 248 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 PRPF38AP2-201ENST00000438179 851 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 MRPL48P1-201ENST00000445390 636 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AL589765.3-201ENST00000446084 462 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 TRY2P-201ENST00000448860 689 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AC010733.1-201ENST00000451515 401 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 RPSAP50-201ENST00000481955 852 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 RN7SL808P-201ENST00000496066 299 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AC008033.2-201ENST00000542626 177 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AP001521.2-201ENST00000608772 546 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AL359757.1-201ENST00000623176 255 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AC112255.1-201ENST00000624070 2493 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 MIPEPP2-201ENST00000422560 1819 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.39□□□□□ -1.71
RSPO3Q9BXY4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 RN7SKP74-201ENST00000362849 309 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 RNA5SP123-201ENST00000363244 119 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 RNU6-673P-201ENST00000365084 104 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AP002530.1-201ENST00000405705 684 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 RPA2P2-201ENST00000419698 796 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 ARAFP2-201ENST00000440565 559 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AC108463.1-201ENST00000450258 347 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 DEFB109F-201ENST00000491870 277 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AC091868.1-201ENST00000508746 304 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 RNA5SP446-201ENST00000515955 82 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AC013701.1-201ENST00000522657 465 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AC084759.1-201ENST00000561168 290 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AC087763.1-201ENST00000603391 286 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 MIR6820-201ENST00000611508 62 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 AC112694.2-201ENST00000623697 768 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 CR381572.2-201ENST00000624852 397 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RSPO3Q9BXY4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms