Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX3Q99909 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 PSAT1P4-201ENST00000466500 526 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 AC022795.1-201ENST00000473808 480 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 AC074386.1-201ENST00000476560 767 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX3Q99909 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 RNU6-1004P-201ENST00000516584 111 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 AF186190.1-201ENST00000517470 480 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX3Q99909 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX3Q99909 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SSX3Q99909 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX3Q99909 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 AC127024.5-201ENST00000580085 462 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 MIR1273E-201ENST00000581165 102 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 AL139124.1-201ENST00000609123 421 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX3Q99909 AC015726.3-201ENST00000624501 418 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 AC116563.2-201ENST00000624751 535 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SSX3Q99909 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SSX3Q99909 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SSX3Q99909 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX3Q99909 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 AC079298.1-201ENST00000625026 1619 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 AC091046.3-201ENST00000631455 1574 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 ADAM5-202ENST00000399789 1942 ntBASIC4.56□□□□□ -1.68
SSX3Q99909 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX3Q99909 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SSX3Q99909 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX3Q99909 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX3Q99909 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC093311.1-201ENST00000506586 2021 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX3Q99909 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SSX3Q99909 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX3Q99909 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX3Q99909 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX3Q99909 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SSX3Q99909 RNA5SP132-201ENST00000364725 118 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 RNA5SP30-201ENST00000365552 115 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC013404.1-201ENST00000413068 249 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX3Q99909 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.55□□□□□ -1.68
SSX3Q99909 SEC63P1-201ENST00000425785 1258 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.55□□□□□ -1.68
SSX3Q99909 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC006326.1-201ENST00000445465 787 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC073587.1-201ENST00000447093 876 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 IFNWP4-201ENST00000453148 294 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 AP000547.1-201ENST00000454360 617 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC116562.1-201ENST00000485355 781 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 AC113430.1-201ENST00000506872 718 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX3Q99909 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX3Q99909 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX3Q99909 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SSX3Q99909 ATP5LP3-201ENST00000514223 304 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.55□□□□□ -1.68
SSX3Q99909 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSX3Q99909 NRBF2P4-201ENST00000520874 850 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SSX3Q99909 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 MRPS21P7-201ENST00000566937 238 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX3Q99909 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.55□□□□□ -1.68
SSX3Q99909 AL450270.1-201ENST00000606160 391 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC079395.2-201ENST00000610982 737 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 AC022467.1-201ENST00000614738 749 ntBASIC4.55□□□□□ -1.68
SSX3Q99909 MIR6826-201ENST00000617808 98 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms