Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CYCSP25-201ENST00000525280 316 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 MED28P5-201ENST00000528254 438 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC008126.1-201ENST00000549019 480 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC121758.1-202ENST00000556917 658 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 TPRX1P1-201ENST00000557620 319 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AP005262.1-201ENST00000582646 997 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC026898.1-201ENST00000586404 571 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC119501.1-201ENST00000603646 475 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC012409.3-201ENST00000611343 981 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AL589743.7-201ENST00000612637 233 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 U4.5-201ENST00000617137 123 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AL357080.1-201ENST00000617394 239 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AC016717.3-201ENST00000624730 554 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 CCT8P1-201ENST00000413611 1657 ntBASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD1Q96NR3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 LINC01613-201ENST00000561476 2780 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 RPL11P4-201ENST00000332269 436 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 FAM32BP-201ENST00000344033 333 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 SNORD16-201ENST00000362803 99 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 RNA5SP350-201ENST00000363298 111 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 RNU6-660P-201ENST00000364566 109 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 Y_RNA.302-201ENST00000364997 102 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 MIR16-1-201ENST00000385271 89 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 BTF3P7-201ENST00000407097 488 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 RNU2-42P-201ENST00000410697 113 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AL009174.1-201ENST00000426577 416 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 VN1R54P-201ENST00000435210 1049 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC242426.1-201ENST00000435270 960 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AL451136.1-201ENST00000435399 325 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 LARP1BP3-201ENST00000437229 869 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC122718.1-201ENST00000439448 744 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AL671855.1-201ENST00000446875 1203 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 VN1R34P-201ENST00000447387 883 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 EPS15P1-201ENST00000448836 336 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 FAM133DP-201ENST00000464802 691 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 SETP14-201ENST00000497538 873 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 MYL12BP2-201ENST00000503948 512 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC091874.2-201ENST00000505889 720 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 SNORA74.1-201ENST00000516320 180 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC073581.1-201ENST00000519036 575 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC008055.1-201ENST00000547032 609 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC009063.1-201ENST00000563342 702 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 TPRKBP2-201ENST00000565969 475 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 RN7SL230P-201ENST00000580835 303 ntBASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC6.03□□□□□ -1.44
PTCHD1Q96NR3 AC073046.2-201ENST00000604756 527 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms