Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC010547.6-201ENST00000571789 193 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 ZNF92P3-201ENST00000596594 954 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AL360012.1-201ENST00000602813 131 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC005252.1-201ENST00000604518 1063 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC080013.6-201ENST00000606185 215 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC100847.1-201ENST00000611316 481 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 RNA5SP440-201ENST00000612665 119 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC104454.1-201ENST00000421341 1401 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 MIR323B-201ENST00000385269 82 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AL009179.1-201ENST00000406085 265 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 GAPDHP42-201ENST00000406848 981 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 SDHDP6-201ENST00000414693 480 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AL596448.1-201ENST00000415024 392 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AL008987.1-201ENST00000415528 237 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 Z75741.2-201ENST00000417272 1167 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 DPY19L1P2-201ENST00000426647 915 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AL391987.1-201ENST00000441025 200 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC064862.4-201ENST00000442180 334 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC068135.1-201ENST00000446164 246 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC010468.1-201ENST00000461022 817 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 BET1P1-201ENST00000482276 359 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 TMEM97P2-201ENST00000517841 403 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 MTCO1P47-201ENST00000523889 1271 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC122688.1-201ENST00000541494 223 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 SS18L2P2-201ENST00000583960 235 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC024257.5-201ENST00000612739 531 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC025574.2-201ENST00000615621 514 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC007342.8-201ENST00000623278 678 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC005618.4-201ENST00000625053 554 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AL121594.5-201ENST00000631724 573 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC111188.2-201ENST00000529697 1387 ntBASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTHRC1Q96CG8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 LINC02019-201ENST00000608605 2060 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms