Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC090897.3-201ENST00000636973 1157 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC073136.1-201ENST00000449426 2884 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 AC137056.2-201ENST00000624055 1958 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 ZNF849P-201ENST00000594711 1566 ntBASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4AQ8WYN0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 RNU6-236P-201ENST00000363886 106 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 VN1R12P-201ENST00000403778 876 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 RNU4-22P-201ENST00000411058 166 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 RPA2P2-201ENST00000419698 796 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 NAP1L4P2-201ENST00000425958 899 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AL450996.1-201ENST00000445574 1202 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC107398.1-201ENST00000486904 505 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 RPS26P24-201ENST00000497656 331 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 UGT2A3P7-201ENST00000510485 734 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 SNORA31.13-201ENST00000516624 135 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 MTCYBP19-201ENST00000517463 1124 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC013701.1-201ENST00000522657 465 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 OR8I1P-201ENST00000529291 931 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC005363.1-201ENST00000530779 351 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC087897.1-201ENST00000550134 156 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 IGBP1P1-201ENST00000554337 1009 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AL359219.2-201ENST00000555184 348 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 NMNAT1P5-201ENST00000559657 841 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC008088.1-201ENST00000580993 280 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC040904.1-201ENST00000590850 223 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC027243.2-201ENST00000602530 724 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AP002906.1-201ENST00000603405 233 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AL365181.4-201ENST00000609800 547 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AC091932.2-201ENST00000623014 291 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 SPATA2P1-201ENST00000431223 2055 ntBASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4AQ8WYN0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 U3.7-201ENST00000363668 216 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 RNU4-68P-201ENST00000364314 141 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AL034403.1-201ENST00000399414 885 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 CHMP1B2P-201ENST00000399581 597 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AL021331.1-201ENST00000402817 582 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 NPM1P38-201ENST00000403835 865 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 GAPDHP42-201ENST00000406848 981 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC093155.2-201ENST00000420734 937 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AL034379.1-201ENST00000423216 253 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 HIGD1AP4-201ENST00000430194 280 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 OR6K5P-201ENST00000447050 945 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 SEPT14P24-201ENST00000447236 180 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 TRY2P-201ENST00000448860 689 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 PRPF38AP1-201ENST00000451976 933 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AL445665.1-202ENST00000452436 324 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms