Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC073073.1-201ENST00000493920 463 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC231760.1-201ENST00000498002 260 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 ATG10-AS1-201ENST00000504846 648 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC067805.1-201ENST00000559344 470 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 BGLT3-201ENST00000564523 994 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC245128.3-201ENST00000594721 748 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC011453.2-201ENST00000603737 729 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC022387.2-201ENST00000604050 448 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AL031320.1-201ENST00000604177 357 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC005084.1-201ENST00000605160 304 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 FAM25E-202ENST00000608562 189 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AL022401.1-201ENST00000619498 108 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 MIR6730-201ENST00000622213 67 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 MTCO1P7-201ENST00000419523 1542 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AC008758.3-201ENST00000507003 1829 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 SAMMSON-226ENST00000642089 1582 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 NPM1P10-201ENST00000398310 865 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AL607077.1-201ENST00000401718 499 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 RNA5SP345-201ENST00000410646 108 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 RNU6-564P-201ENST00000410983 104 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AC007738.1-201ENST00000413892 348 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 OR13Z1P-201ENST00000416141 834 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 ARAFP1-201ENST00000422172 605 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AC104333.2-201ENST00000422630 192 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 NPM1P33-201ENST00000438918 872 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 SLC25A18P1-201ENST00000449385 454 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 RPL31P53-201ENST00000457065 348 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 SNORA70.17-201ENST00000516449 133 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 RNU6-362P-201ENST00000516736 90 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 RPL23AP53-201ENST00000521854 457 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 PCNPP1-201ENST00000552501 511 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 Mico1.1-201ENST00000611698 204 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AL049539.1-201ENST00000611964 459 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AC009643.2-201ENST00000603543 1448 ntBASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
C9orf40Q8IXQ3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.53□□□□□ -1.69
C9orf40Q8IXQ3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC132825.1-201ENST00000463573 2247 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AL133270.1-201ENST00000402635 279 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 RPL10P10-201ENST00000403509 664 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AL034379.1-201ENST00000423216 253 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AJ239321.1-201ENST00000424255 564 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC007559.1-201ENST00000428736 355 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AURKAPS2-201ENST00000454983 333 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 RN7SL517P-201ENST00000462240 305 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC063943.1-201ENST00000465434 453 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms