Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 MYL12AP1-201ENST00000518490 515 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 OR7E128P-201ENST00000532736 1024 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 MIR4489-201ENST00000578869 62 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 LINC00901.1-201ENST00000617252 152 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AC055839.1-201ENST00000634467 498 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 AC108751.5-201ENST00000492880 1336 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC50Q8IVM0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 RNU6-171P-201ENST00000384354 107 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC007068.1-201ENST00000396690 844 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 SEPT7P8-201ENST00000413308 775 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 NDUFA5P8-201ENST00000449019 346 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 PPIAP20-201ENST00000449839 135 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 RN7SL172P-201ENST00000460535 303 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 RFPL4AP3-201ENST00000515267 345 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 RNA5SP43-201ENST00000516559 110 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC087783.2-201ENST00000605070 562 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AL158196.1-201ENST00000616786 434 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 AC087821.1-201ENST00000623639 567 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC50Q8IVM0 SNURFL-201ENST00000309296 343 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 RNA5SP435-201ENST00000364044 108 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 SNORA79B-201ENST00000410557 148 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 AP000534.2-201ENST00000412729 568 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 RGS17P1-201ENST00000423358 553 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 FABP7P1-201ENST00000424004 391 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 CKS1BP6-201ENST00000424932 240 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 MTCO3P17-201ENST00000443775 513 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 AL137845.2-201ENST00000444292 988 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 RN7SL517P-201ENST00000462240 305 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 AC090142.2-201ENST00000483263 416 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 HIGD1AP14-201ENST00000507617 282 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 MIR1269B-201ENST00000580405 75 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 SNX18P1Y-201ENST00000616231 511 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 CASC19-206ENST00000641028 1430 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms