Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL450345.1-202ENST00000605741 3881 ntBASIC5.41□□□□□ -1.54
PRPF39Q86UA1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PRPF39Q86UA1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 OR9G4-201ENST00000302957 984 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 SNORA48.4-201ENST00000391089 134 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 MIR937-201ENST00000401271 86 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 HSPA8P15-201ENST00000401676 786 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC124944.2-201ENST00000429866 1242 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 MTND4P15-201ENST00000437913 1033 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AL513321.1-201ENST00000441175 761 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 NOP56P2-201ENST00000447491 769 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC104634.1-201ENST00000452720 462 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AL645937.3-201ENST00000453647 936 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 RPL10P17-201ENST00000453852 316 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AL389915.2-201ENST00000454576 441 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 CBX1P5-201ENST00000475330 559 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 RPL7P40-201ENST00000481703 745 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 RN7SL423P-201ENST00000486202 304 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC020937.1-201ENST00000519677 1013 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC004923.2-201ENST00000529649 369 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 RPL10P14-201ENST00000565265 298 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC022884.3-201ENST00000579571 248 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC069307.1-201ENST00000602820 447 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC110792.4-201ENST00000609843 298 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 MIR6839-201ENST00000620425 113 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC068870.2-201ENST00000620635 389 ntBASIC5.4□□□□□ -1.54
PRPF39Q86UA1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF39Q86UA1 AC010266.2-201ENST00000564741 3255 ntBASIC5.4□□□□□ -1.55
PRPF39Q86UA1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF39Q86UA1 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
PRPF39Q86UA1 AC104623.2-202ENST00000623477 4002 ntBASIC5.4□□□□□ -1.55
PRPF39Q86UA1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF39Q86UA1 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF39Q86UA1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
PRPF39Q86UA1 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 THAP12P5-201ENST00000405864 2275 ntBASIC5.39□□□□□ -1.55
PRPF39Q86UA1 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 RNU1-74P-201ENST00000384108 171 ntBASIC5.39□□□□□ -1.55
PRPF39Q86UA1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.39□□□□□ -1.55
PRPF39Q86UA1 MTATP6P19-201ENST00000413797 659 ntBASIC5.39□□□□□ -1.55
PRPF39Q86UA1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 PTP4A1P3-201ENST00000433661 420 ntBASIC5.39□□□□□ -1.55
PRPF39Q86UA1 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 AC108161.1-201ENST00000461060 402 ntBASIC5.39□□□□□ -1.55
PRPF39Q86UA1 AC107398.1-201ENST00000486904 505 ntBASIC5.39□□□□□ -1.55
PRPF39Q86UA1 RPS23P1-201ENST00000491662 432 ntBASIC5.39□□□□□ -1.55
PRPF39Q86UA1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 AC100784.1-201ENST00000522790 310 ntBASIC5.39□□□□□ -1.55
PRPF39Q86UA1 OR8K2P-201ENST00000524645 927 ntBASIC5.39□□□□□ -1.55
PRPF39Q86UA1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF39Q86UA1 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms