Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL353625.1-202ENST00000366273 571 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 SNORD116-2-201ENST00000384274 95 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 SNORD116-6-201ENST00000384711 96 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 RPL21P67-201ENST00000402896 478 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AP002530.1-201ENST00000405705 684 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 MTCO1P51-201ENST00000427672 1060 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 FAM96AP1-201ENST00000430879 482 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 BX842559.2-201ENST00000451418 605 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC021660.1-201ENST00000465006 554 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 TRBV8-1-201ENST00000481590 279 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 ENPP7P11-201ENST00000505915 627 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 SNORA70.11-201ENST00000515987 138 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 RNU6-1334P-201ENST00000516032 105 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 SNORA70.13-201ENST00000516116 138 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AL132857.1-201ENST00000555180 708 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC027281.1-201ENST00000574178 758 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 OOSP1P2-201ENST00000579644 351 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC069307.1-201ENST00000602820 447 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC079395.2-201ENST00000610982 737 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC118658.2-201ENST00000618697 459 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AP003485.2-201ENST00000623636 610 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 SAMMSON-209ENST00000641222 1100 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC011755.1-201ENST00000623763 2049 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC009501.3-201ENST00000605001 1352 ntBASIC5.16□□□□□ -1.58
ZNF549Q6P9A3 AC087565.3-202ENST00000642085 1603 ntBASIC5.15□□□□□ -1.58
ZNF549Q6P9A3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ZNF549Q6P9A3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZNF549Q6P9A3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZNF549Q6P9A3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
ZNF549Q6P9A3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.15□□□□□ -1.58
ZNF549Q6P9A3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
ZNF549Q6P9A3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
ZNF549Q6P9A3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
ZNF549Q6P9A3 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 U3.2-201ENST00000362981 210 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 RNA5SP223-201ENST00000365174 120 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 PEX12P1-201ENST00000400284 1048 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 OR51B3P-201ENST00000412287 913 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 RPL7L1P9-201ENST00000431298 745 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 GAPDHP58-201ENST00000438477 1006 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 RPL7AP61-201ENST00000443410 636 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 RPL7P33-201ENST00000444159 742 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC011225.1-201ENST00000457751 369 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC245028.2-201ENST00000458673 253 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 UBA52P7-201ENST00000486088 380 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 HMGB1P38-201ENST00000490557 577 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AP000563.1-201ENST00000490865 758 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC090543.1-201ENST00000492168 485 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 EIF3LP3-201ENST00000495197 822 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC108693.1-201ENST00000496068 432 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 PGAM1P13-201ENST00000507497 754 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC121161.1-201ENST00000510606 652 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AP001207.2-201ENST00000519490 539 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC087894.1-201ENST00000538359 518 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms