Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HERC4Q5GLZ8 AP001542.1-201ENST00000591314 200 ntBASIC5.6□□□□□ -1.51
HERC4Q5GLZ8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.6□□□□□ -1.51
HERC4Q5GLZ8 MIR6780A-201ENST00000615089 68 ntBASIC5.6□□□□□ -1.51
HERC4Q5GLZ8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HERC4Q5GLZ8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HERC4Q5GLZ8 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HERC4Q5GLZ8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HERC4Q5GLZ8 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HERC4Q5GLZ8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AC093849.1-201ENST00000563631 2209 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 RNA5SP505-201ENST00000364748 108 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 SNORA77-201ENST00000408716 125 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 RNU2-50P-201ENST00000410494 143 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AC013429.2-201ENST00000418798 781 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 OR2AM1P-201ENST00000422137 422 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AL161747.1-201ENST00000480068 358 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AC098583.1-201ENST00000480875 255 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 ENPP7P11-201ENST00000505915 627 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 SLC25A15P5-201ENST00000508033 253 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AC034205.1-201ENST00000520621 638 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 MIR1254-2-201ENST00000579553 63 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 MIR4737-201ENST00000583979 81 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AC105254.2-201ENST00000603636 436 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 NF1P10-201ENST00000613227 742 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AC073575.2-201ENST00000614212 627 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 AP000648.2-201ENST00000624182 404 ntBASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC4Q5GLZ8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HERC4Q5GLZ8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
HERC4Q5GLZ8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HERC4Q5GLZ8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
HERC4Q5GLZ8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 NXF4-202ENST00000416098 1465 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AC132825.1-201ENST00000463573 2247 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 GAPDHP15-201ENST00000398586 975 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 DDX39BP1-205ENST00000422507 192 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AL354714.3-201ENST00000447284 493 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 HMGB1P4-201ENST00000455362 567 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AC012339.2-201ENST00000523996 453 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AP006289.1-201ENST00000538089 277 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 AC009117.1-201ENST00000563948 554 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 MIR5096-201ENST00000583713 70 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 BX005214.3-202ENST00000619809 325 ntBASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC4Q5GLZ8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HERC4Q5GLZ8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HERC4Q5GLZ8 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.57□□□□□ -1.52
HERC4Q5GLZ8 RNU6-1331P-201ENST00000363658 106 ntBASIC5.57□□□□□ -1.52
HERC4Q5GLZ8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HERC4Q5GLZ8 SNORA70.10-201ENST00000384515 134 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms