Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LMO4P61968 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LMO4P61968 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.24□□□□□ -1.73
LMO4P61968 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.24□□□□□ -1.73
LMO4P61968 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LMO4P61968 OR4K17-201ENST00000315543 1032 ntBASIC4.24□□□□□ -1.73
LMO4P61968 RN7SKP149-201ENST00000363008 344 ntBASIC4.24□□□□□ -1.73
LMO4P61968 RNU6-152P-201ENST00000384037 107 ntBASIC4.24□□□□□ -1.73
LMO4P61968 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LMO4P61968 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LMO4P61968 AL358178.1-201ENST00000407698 397 ntBASIC4.24□□□□□ -1.73
LMO4P61968 COX6B1P1-201ENST00000415962 213 ntBASIC4.24□□□□□ -1.73
LMO4P61968 MTCYBP7-201ENST00000419540 1134 ntBASIC4.24□□□□□ -1.73
LMO4P61968 REREP1Y-201ENST00000422655 198 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AC093084.1-201ENST00000424233 687 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 AL360081.1-201ENST00000428299 555 ntBASIC4.24□□□□□ -1.73
LMO4P61968 MTND4LP14-201ENST00000429447 288 ntBASIC4.24□□□□□ -1.73
LMO4P61968 RPL7AP49-201ENST00000429522 581 ntBASIC4.24□□□□□ -1.73
LMO4P61968 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.24□□□□□ -1.73
LMO4P61968 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.24□□□□□ -1.73
LMO4P61968 AL591438.1-201ENST00000433508 581 ntBASIC4.24□□□□□ -1.73
LMO4P61968 REREP2Y-201ENST00000439103 200 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AC023271.1-201ENST00000445936 1090 ntBASIC4.24□□□□□ -1.73
LMO4P61968 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.24□□□□□ -1.73
LMO4P61968 AC020779.1-201ENST00000478757 796 ntBASIC4.24□□□□□ -1.73
LMO4P61968 RN7SL814P-201ENST00000487715 300 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AC140172.1-201ENST00000502928 141 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.24□□□□□ -1.73
LMO4P61968 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.24□□□□□ -1.73
LMO4P61968 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.24□□□□□ -1.73
LMO4P61968 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.24□□□□□ -1.73
LMO4P61968 AC113192.3-201ENST00000529152 742 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.24□□□□□ -1.73
LMO4P61968 AC139103.1-201ENST00000534696 1030 ntBASIC4.24□□□□□ -1.73
LMO4P61968 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.24□□□□□ -1.73
LMO4P61968 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.24□□□□□ -1.73
LMO4P61968 AC074029.2-201ENST00000551045 634 ntBASIC4.24□□□□□ -1.73
LMO4P61968 NMNAT1P1-201ENST00000554095 876 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AL358913.1-201ENST00000554342 121 ntBASIC4.24□□□□□ -1.73
LMO4P61968 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.24□□□□□ -1.73
LMO4P61968 AL049838.1-201ENST00000563647 981 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 MEMO1P5-201ENST00000604810 406 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AC073111.2-201ENST00000605657 1075 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AP005432.2-201ENST00000608162 586 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AC010632.3-201ENST00000611377 369 ntBASIC4.24□□□□□ -1.73
LMO4P61968 AL163051.2-201ENST00000618976 735 ntBASIC4.24□□□□□ -1.73
LMO4P61968 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.24□□□□□ -1.73
LMO4P61968 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.24□□□□□ -1.73
LMO4P61968 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LMO4P61968 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 IRF5P1-201ENST00000504852 2164 ntBASIC4.24□□□□□ -1.73
LMO4P61968 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LMO4P61968 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.23□□□□□ -1.73
LMO4P61968 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 SCARNA15-201ENST00000607520 4325 ntBASIC4.23□□□□□ -1.73
LMO4P61968 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.23□□□□□ -1.73
LMO4P61968 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.23□□□□□ -1.73
LMO4P61968 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
LMO4P61968 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.23□□□□□ -1.73
LMO4P61968 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 SNORA66-201ENST00000384792 133 ntBASIC4.23□□□□□ -1.73
LMO4P61968 Z97832.1-201ENST00000402490 328 ntBASIC4.23□□□□□ -1.73
LMO4P61968 RPL7P58-201ENST00000402913 758 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AP002530.1-201ENST00000405705 684 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.23□□□□□ -1.73
LMO4P61968 AC069282.1-201ENST00000411911 526 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.23□□□□□ -1.73
LMO4P61968 VPS26BP1-201ENST00000417155 755 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AC009784.1-201ENST00000426484 460 ntBASIC4.23□□□□□ -1.73
LMO4P61968 MGAT2P2-201ENST00000427194 797 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.23□□□□□ -1.73
LMO4P61968 HMGB3P5-201ENST00000428894 612 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AC090018.1-201ENST00000434369 367 ntBASIC4.23□□□□□ -1.73
LMO4P61968 PRPF38AP2-201ENST00000438179 851 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.23□□□□□ -1.73
LMO4P61968 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.23□□□□□ -1.73
LMO4P61968 AC090804.1-201ENST00000448870 490 ntBASIC4.23□□□□□ -1.73
LMO4P61968 RN7SL443P-201ENST00000464331 290 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AC082651.2-201ENST00000496833 166 ntBASIC4.23□□□□□ -1.73
LMO4P61968 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.23□□□□□ -1.73
LMO4P61968 AC097173.1-201ENST00000505862 819 ntBASIC4.23□□□□□ -1.73
LMO4P61968 ASNSP4-201ENST00000511103 447 ntBASIC4.23□□□□□ -1.73
LMO4P61968 BTF3P13-201ENST00000513224 490 ntBASIC4.23□□□□□ -1.73
LMO4P61968 RNU6-760P-201ENST00000516078 97 ntBASIC4.23□□□□□ -1.73
LMO4P61968 RNA5SP43-201ENST00000516559 110 ntBASIC4.23□□□□□ -1.73
LMO4P61968 MTND2P32-201ENST00000521584 1038 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.23□□□□□ -1.73
LMO4P61968 AC109635.6-201ENST00000525487 1113 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms