Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RNU1-65P-201ENST00000363919 148 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.52□□□□□ -1.85
CKS1BP61024 MIR589-201ENST00000385238 99 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 AL136131.1-201ENST00000406079 803 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 RPL34P3-201ENST00000421454 338 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.52□□□□□ -1.85
CKS1BP61024 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC3.52□□□□□ -1.85
CKS1BP61024 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC3.52□□□□□ -1.85
CKS1BP61024 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC3.52□□□□□ -1.85
CKS1BP61024 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC3.52□□□□□ -1.85
CKS1BP61024 AL445665.1-202ENST00000452436 324 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 RPL5P32-201ENST00000454085 879 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.52□□□□□ -1.85
CKS1BP61024 SNRPGP5-201ENST00000456003 220 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 RN7SL51P-201ENST00000468230 285 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 AC068305.1-201ENST00000497406 726 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 CYCSP22-201ENST00000517555 339 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.52□□□□□ -1.85
CKS1BP61024 NRBF2P4-201ENST00000520874 850 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC3.52□□□□□ -1.85
CKS1BP61024 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC3.52□□□□□ -1.85
CKS1BP61024 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 CCDC58P1-201ENST00000578567 430 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 MIR4644-201ENST00000579929 84 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 AC091979.2-201ENST00000607514 214 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC3.52□□□□□ -1.85
CKS1BP61024 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC3.52□□□□□ -1.85
CKS1BP61024 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.52□□□□□ -1.85
CKS1BP61024 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 CUL4AP1-201ENST00000514750 1863 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CKS1BP61024 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CKS1BP61024 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CKS1BP61024 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CKS1BP61024 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.51□□□□□ -1.85
CKS1BP61024 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CKS1BP61024 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC3.51□□□□□ -1.85
CKS1BP61024 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.51□□□□□ -1.85
CKS1BP61024 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CKS1BP61024 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CKS1BP61024 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
CKS1BP61024 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.51□□□□□ -1.85
CKS1BP61024 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CKS1BP61024 AC023490.2-201ENST00000359859 470 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 RNA5SP52-201ENST00000362448 134 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 RNU1-150P-201ENST00000362491 162 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 U3.2-201ENST00000362981 210 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 RNA5SP394-201ENST00000364216 119 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 RHOT1P2-201ENST00000366423 333 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CKS1BP61024 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.51□□□□□ -1.85
CKS1BP61024 RNA5SP39-201ENST00000411245 120 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.51□□□□□ -1.85
CKS1BP61024 CEACAMP8-201ENST00000413902 580 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CKS1BP61024 FABP7P1-201ENST00000424004 391 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AL138785.1-201ENST00000425821 331 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AC022022.1-201ENST00000430304 178 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC3.51□□□□□ -1.85
CKS1BP61024 GAPDHP34-201ENST00000432112 823 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 NDUFA5P1-201ENST00000433858 341 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 CLUHP1-201ENST00000435012 1190 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 Z84478.1-201ENST00000438230 1219 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.51□□□□□ -1.85
CKS1BP61024 AC004980.3-201ENST00000447046 365 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 GAPDHP25-201ENST00000447061 1001 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AC105399.1-202ENST00000447303 205 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 MRPL35P2-201ENST00000448009 511 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.51□□□□□ -1.85
CKS1BP61024 AL359839.1-201ENST00000451975 1160 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 HMGB3P21-201ENST00000452483 547 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AC016687.1-201ENST00000482574 353 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 RPL9P15-201ENST00000491096 532 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 CBX1-205ENST00000495350 550 ntTSL 2 BASIC3.51□□□□□ -1.85
CKS1BP61024 FTH1P9-201ENST00000513251 355 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 RNA5SP271-201ENST00000516700 88 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AC105031.1-201ENST00000518550 476 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC3.51□□□□□ -1.85
CKS1BP61024 AP004607.2-201ENST00000533949 322 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CKS1BP61024 AC078878.1-201ENST00000539832 958 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.51□□□□□ -1.85
CKS1BP61024 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.51□□□□□ -1.85
CKS1BP61024 AC068305.2-201ENST00000550567 1205 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.51□□□□□ -1.85
CKS1BP61024 GNG2-208ENST00000554875 430 ntTSL 5 BASIC3.51□□□□□ -1.85
CKS1BP61024 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.51□□□□□ -1.85
CKS1BP61024 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.51□□□□□ -1.85
CKS1BP61024 AGGF1P8-201ENST00000562979 1000 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 DPPA2P4-201ENST00000563717 878 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC3.51□□□□□ -1.85
CKS1BP61024 AC009101.1-201ENST00000568135 242 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC3.51□□□□□ -1.85
CKS1BP61024 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms