Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 PSMA6P1-201ENST00000400275 741 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 RNA5SP198-201ENST00000410376 127 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 FCF1P2-201ENST00000415284 583 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC092634.6-201ENST00000418558 192 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 AL389915.1-201ENST00000422463 466 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA1P56159 AL512649.1-201ENST00000428997 581 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 DYNLL1P7-201ENST00000429273 258 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.84□□□□□ -1.47
GFRA1P56159 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA1P56159 MTND2P20-201ENST00000440805 661 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 AL161722.1-201ENST00000446972 1032 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA1P56159 RPL18AP17-201ENST00000455326 198 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA1P56159 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC022415.1-202ENST00000486612 523 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA1P56159 RN7SKP298-201ENST00000515950 94 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 IGHV3-32-201ENST00000519182 355 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.84□□□□□ -1.47
GFRA1P56159 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.84□□□□□ -1.47
GFRA1P56159 MTCO3P24-201ENST00000572729 782 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.84□□□□□ -1.47
GFRA1P56159 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.84□□□□□ -1.47
GFRA1P56159 AC020765.1-201ENST00000604296 328 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 AC067959.1-201ENST00000604334 379 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA1P56159 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.84□□□□□ -1.47
GFRA1P56159 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.84□□□□□ -1.47
GFRA1P56159 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 AC015689.2-201ENST00000528172 1738 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA1P56159 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
GFRA1P56159 BX284613.1-201ENST00000452221 1641 ntBASIC5.84□□□□□ -1.47
GFRA1P56159 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
GFRA1P56159 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
GFRA1P56159 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.84□□□□□ -1.48
GFRA1P56159 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
GFRA1P56159 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
GFRA1P56159 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC5.84□□□□□ -1.48
GFRA1P56159 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
GFRA1P56159 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 MSL3P1-202ENST00000440028 1468 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 PPBPP2-201ENST00000513150 1362 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AC010624.4-201ENST00000597606 1351 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
GFRA1P56159 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 RNU6-216P-201ENST00000363282 104 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 SNORD35A-201ENST00000363389 86 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.83□□□□□ -1.48
GFRA1P56159 AC003045.1-201ENST00000398779 713 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AL023284.3-201ENST00000407767 334 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 AC234782.4-201ENST00000417646 1048 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 TMBIM7P-201ENST00000418074 855 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AC048351.1-201ENST00000420064 602 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms