Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC027281.1-201ENST00000574178 758 ntBASIC5.03□□□□□ -1.6
LIMK2P53671 MIR3934-201ENST00000579806 107 ntBASIC5.03□□□□□ -1.6
LIMK2P53671 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.03□□□□□ -1.6
LIMK2P53671 MIR3936-201ENST00000584304 110 ntBASIC5.03□□□□□ -1.6
LIMK2P53671 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.03□□□□□ -1.6
LIMK2P53671 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
LIMK2P53671 AC015660.5-201ENST00000623238 564 ntBASIC5.03□□□□□ -1.6
LIMK2P53671 AC091905.4-201ENST00000623432 202 ntBASIC5.03□□□□□ -1.6
LIMK2P53671 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LIMK2P53671 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK2P53671 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.03□□□□□ -1.6
LIMK2P53671 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.03□□□□□ -1.6
LIMK2P53671 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.03□□□□□ -1.6
LIMK2P53671 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK2P53671 AC107021.2-201ENST00000567714 2095 ntBASIC5.03□□□□□ -1.6
LIMK2P53671 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.03□□□□□ -1.6
LIMK2P53671 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.02□□□□□ -1.61
LIMK2P53671 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
LIMK2P53671 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK2P53671 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK2P53671 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK2P53671 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.02□□□□□ -1.61
LIMK2P53671 RN7SKP104-201ENST00000362605 328 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 RNA5SP123-201ENST00000363244 119 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 SNORA51.8-201ENST00000384234 132 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 AL607077.1-201ENST00000401718 499 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 RNU6-564P-201ENST00000410983 104 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK2P53671 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK2P53671 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK2P53671 ARAFP2-201ENST00000440565 559 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK2P53671 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK2P53671 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK2P53671 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK2P53671 BRD9P1-201ENST00000529855 560 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 AC005868.1-201ENST00000536421 331 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 DUX4L52-201ENST00000549363 777 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK2P53671 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK2P53671 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.02□□□□□ -1.61
LIMK2P53671 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK2P53671 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK2P53671 AC245128.3-201ENST00000594721 748 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 AC104785.1-201ENST00000603220 588 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 AC022387.2-201ENST00000604050 448 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 AC100814.1-201ENST00000606963 623 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 AC103798.2-201ENST00000624292 632 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 SMG1P4-204ENST00000523028 4131 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK2P53671 INTS6P1-201ENST00000504674 2530 ntBASIC5.02□□□□□ -1.61
LIMK2P53671 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK2P53671 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK2P53671 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK2P53671 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK2P53671 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK2P53671 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK2P53671 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK2P53671 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK2P53671 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK2P53671 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK2P53671 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK2P53671 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK2P53671 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
LIMK2P53671 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.01□□□□□ -1.61
LIMK2P53671 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK2P53671 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK2P53671 SNORA73.1-201ENST00000363107 205 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 RN7SKP115-201ENST00000363177 317 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 OR13C3-201ENST00000374781 1108 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LIMK2P53671 AL035419.1-201ENST00000397037 564 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 RN7SKP114-201ENST00000410327 279 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 GJA6P-201ENST00000415117 1042 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 TRIM60P17-201ENST00000415181 719 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 TMBIM7P-201ENST00000418074 855 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.01□□□□□ -1.61
LIMK2P53671 FABP7P2-201ENST00000429946 379 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 MAPRE1P3-201ENST00000435438 796 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 HMGB1P4-201ENST00000455362 567 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 RPS3AP41-201ENST00000462701 778 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK2P53671 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.01□□□□□ -1.61
LIMK2P53671 RN7SKP260-201ENST00000516907 149 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK2P53671 AC012339.2-201ENST00000523996 453 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK2P53671 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK2P53671 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK2P53671 MIR4480-201ENST00000582492 71 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK2P53671 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.01□□□□□ -1.61
LIMK2P53671 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.01□□□□□ -1.61
LIMK2P53671 FAM25E-202ENST00000608562 189 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 MIR6748-201ENST00000610433 71 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 AL158062.1-201ENST00000619632 745 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 AC006213.5-201ENST00000619673 288 ntBASIC5.01□□□□□ -1.61
LIMK2P53671 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LIMK2P53671 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms