Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPAP53621 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COPAP53621 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.74□□□□□ -1.49
COPAP53621 AP000473.2-201ENST00000602659 1537 ntBASIC5.74□□□□□ -1.49
COPAP53621 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.73□□□□□ -1.49
COPAP53621 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
COPAP53621 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COPAP53621 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.73□□□□□ -1.49
COPAP53621 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 RNU4-31P-201ENST00000384211 141 ntBASIC5.73□□□□□ -1.49
COPAP53621 MIR130A-201ENST00000385274 89 ntBASIC5.73□□□□□ -1.49
COPAP53621 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COPAP53621 EIF4A1P1-201ENST00000420241 934 ntBASIC5.73□□□□□ -1.49
COPAP53621 AC093422.3-201ENST00000428506 305 ntBASIC5.73□□□□□ -1.49
COPAP53621 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.73□□□□□ -1.49
COPAP53621 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.73□□□□□ -1.49
COPAP53621 AL627308.1-201ENST00000435693 821 ntBASIC5.73□□□□□ -1.49
COPAP53621 AC019185.1-201ENST00000442718 389 ntBASIC5.73□□□□□ -1.49
COPAP53621 OR7E116P-201ENST00000448529 957 ntBASIC5.73□□□□□ -1.49
COPAP53621 RPS23P9-201ENST00000448848 438 ntBASIC5.73□□□□□ -1.49
COPAP53621 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.73□□□□□ -1.49
COPAP53621 AL096803.2-201ENST00000450032 677 ntBASIC5.73□□□□□ -1.49
COPAP53621 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.73□□□□□ -1.49
COPAP53621 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.73□□□□□ -1.49
COPAP53621 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.73□□□□□ -1.49
COPAP53621 AC105384.2-201ENST00000508433 640 ntBASIC5.73□□□□□ -1.49
COPAP53621 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.73□□□□□ -1.49
COPAP53621 SNORA19.3-201ENST00000516165 130 ntBASIC5.73□□□□□ -1.49
COPAP53621 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.73□□□□□ -1.49
COPAP53621 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.73□□□□□ -1.49
COPAP53621 AL390334.1-201ENST00000556395 450 ntBASIC5.73□□□□□ -1.49
COPAP53621 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.73□□□□□ -1.49
COPAP53621 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.73□□□□□ -1.49
COPAP53621 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.73□□□□□ -1.49
COPAP53621 AL022067.1-201ENST00000602426 454 ntBASIC5.73□□□□□ -1.49
COPAP53621 SUGT1P3-202ENST00000604259 383 ntBASIC5.73□□□□□ -1.49
COPAP53621 AL049844.2-201ENST00000604280 628 ntBASIC5.73□□□□□ -1.49
COPAP53621 AC005840.5-201ENST00000619166 599 ntBASIC5.73□□□□□ -1.49
COPAP53621 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.73□□□□□ -1.49
COPAP53621 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.73□□□□□ -1.49
COPAP53621 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
COPAP53621 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPAP53621 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 LINC01963-201ENST00000562038 3148 ntBASIC5.72□□□□□ -1.49
COPAP53621 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
COPAP53621 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
COPAP53621 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 MFSD8-239ENST00000641590 2479 ntBASIC5.72□□□□□ -1.49
COPAP53621 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
COPAP53621 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.72□□□□□ -1.49
COPAP53621 U3.7-201ENST00000363668 216 ntBASIC5.72□□□□□ -1.49
COPAP53621 AC007618.1-201ENST00000366455 732 ntBASIC5.72□□□□□ -1.49
COPAP53621 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.72□□□□□ -1.49
COPAP53621 RNU1-74P-201ENST00000384108 171 ntBASIC5.72□□□□□ -1.49
COPAP53621 MIR105-2-201ENST00000385083 81 ntBASIC5.72□□□□□ -1.49
COPAP53621 VDAC2P1-201ENST00000399358 958 ntBASIC5.72□□□□□ -1.49
COPAP53621 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.72□□□□□ -1.49
COPAP53621 AL034374.1-201ENST00000406329 351 ntBASIC5.72□□□□□ -1.49
COPAP53621 DPPA2P3-201ENST00000411853 655 ntBASIC5.72□□□□□ -1.49
COPAP53621 AC023128.2-201ENST00000420880 1223 ntBASIC5.72□□□□□ -1.49
COPAP53621 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.72□□□□□ -1.49
COPAP53621 MTND1P26-201ENST00000440488 538 ntBASIC5.72□□□□□ -1.49
COPAP53621 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.72□□□□□ -1.49
COPAP53621 AC097499.1-201ENST00000444277 208 ntBASIC5.72□□□□□ -1.49
COPAP53621 RPL7L1P1-201ENST00000448259 785 ntBASIC5.72□□□□□ -1.49
COPAP53621 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.72□□□□□ -1.49
COPAP53621 AC020898.1-201ENST00000474167 787 ntBASIC5.72□□□□□ -1.49
COPAP53621 RN7SL583P-201ENST00000475692 287 ntBASIC5.72□□□□□ -1.49
COPAP53621 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 RN7SL809P-201ENST00000482040 297 ntBASIC5.72□□□□□ -1.49
COPAP53621 RPS3AP6-201ENST00000484430 795 ntBASIC5.72□□□□□ -1.49
COPAP53621 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.72□□□□□ -1.49
COPAP53621 snoU109.6-201ENST00000516831 118 ntBASIC5.72□□□□□ -1.49
COPAP53621 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.72□□□□□ -1.49
COPAP53621 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.72□□□□□ -1.49
COPAP53621 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.72□□□□□ -1.49
COPAP53621 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.72□□□□□ -1.49
COPAP53621 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.72□□□□□ -1.49
COPAP53621 AC019322.1-201ENST00000571869 389 ntBASIC5.72□□□□□ -1.49
COPAP53621 MTATP6P24-201ENST00000576835 677 ntBASIC5.72□□□□□ -1.49
COPAP53621 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.72□□□□□ -1.49
COPAP53621 AC090607.5-201ENST00000615692 224 ntBASIC5.72□□□□□ -1.49
COPAP53621 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.72□□□□□ -1.49
COPAP53621 AC018445.2-201ENST00000622987 260 ntBASIC5.72□□□□□ -1.49
COPAP53621 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms