Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MTATP6P27-201ENST00000416987 621 ntBASIC6.97□□□□□ -1.29
USP11P51784 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.97□□□□□ -1.29
USP11P51784 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 AC023141.3-201ENST00000436698 278 ntBASIC6.97□□□□□ -1.29
USP11P51784 AC079922.1-201ENST00000443291 359 ntBASIC6.97□□□□□ -1.29
USP11P51784 AL137845.2-201ENST00000444292 988 ntBASIC6.97□□□□□ -1.29
USP11P51784 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 AL050341.1-201ENST00000447743 313 ntBASIC6.97□□□□□ -1.29
USP11P51784 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.97□□□□□ -1.29
USP11P51784 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.97□□□□□ -1.29
USP11P51784 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.97□□□□□ -1.29
USP11P51784 OR11I1P-201ENST00000486033 954 ntBASIC6.97□□□□□ -1.29
USP11P51784 NCOR1P1-202ENST00000486162 291 ntBASIC6.97□□□□□ -1.29
USP11P51784 RPL37P23-201ENST00000492641 294 ntBASIC6.97□□□□□ -1.29
USP11P51784 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.97□□□□□ -1.29
USP11P51784 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 Y_RNA.702-201ENST00000516843 96 ntBASIC6.97□□□□□ -1.29
USP11P51784 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 IGKV3D-25-201ENST00000519599 235 ntBASIC6.97□□□□□ -1.29
USP11P51784 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.97□□□□□ -1.29
USP11P51784 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.97□□□□□ -1.29
USP11P51784 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.97□□□□□ -1.29
USP11P51784 AC002310.3-201ENST00000569728 723 ntBASIC6.97□□□□□ -1.29
USP11P51784 AC127024.5-201ENST00000580085 462 ntBASIC6.97□□□□□ -1.29
USP11P51784 AC020916.2-201ENST00000591242 360 ntBASIC6.97□□□□□ -1.29
USP11P51784 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 C8orf59P2-201ENST00000603441 271 ntBASIC6.97□□□□□ -1.29
USP11P51784 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.97□□□□□ -1.29
USP11P51784 AC097505.1-201ENST00000610199 565 ntBASIC6.97□□□□□ -1.29
USP11P51784 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.97□□□□□ -1.29
USP11P51784 AC096861.1-201ENST00000616652 240 ntBASIC6.97□□□□□ -1.29
USP11P51784 RFPL4AP6-201ENST00000616792 846 ntBASIC6.97□□□□□ -1.29
USP11P51784 AL512652.1-201ENST00000619006 500 ntBASIC6.97□□□□□ -1.29
USP11P51784 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.97□□□□□ -1.29
USP11P51784 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.97□□□□□ -1.29
USP11P51784 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.97□□□□□ -1.29
USP11P51784 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
USP11P51784 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USP11P51784 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.29
USP11P51784 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.96□□□□□ -1.29
USP11P51784 AC024587.1-201ENST00000505925 2157 ntBASIC6.96□□□□□ -1.29
USP11P51784 MTND4P16-201ENST00000466108 1367 ntBASIC6.96□□□□□ -1.29
USP11P51784 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
USP11P51784 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
USP11P51784 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USP11P51784 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.96□□□□□ -1.29
USP11P51784 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.96□□□□□ -1.29
USP11P51784 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
USP11P51784 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
USP11P51784 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USP11P51784 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.96□□□□□ -1.3
USP11P51784 IL6STP1-201ENST00000346911 1020 ntBASIC6.96□□□□□ -1.3
USP11P51784 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USP11P51784 Y_RNA.61-201ENST00000362835 102 ntBASIC6.96□□□□□ -1.3
USP11P51784 RNU105B-201ENST00000364478 208 ntBASIC6.96□□□□□ -1.3
USP11P51784 RN7SKP151-201ENST00000410230 316 ntBASIC6.96□□□□□ -1.3
USP11P51784 RNA5SP251-201ENST00000410614 137 ntBASIC6.96□□□□□ -1.3
USP11P51784 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.96□□□□□ -1.3
USP11P51784 AL096829.1-201ENST00000413677 457 ntBASIC6.96□□□□□ -1.3
USP11P51784 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.96□□□□□ -1.3
USP11P51784 OR51A5P-201ENST00000415429 942 ntBASIC6.96□□□□□ -1.3
USP11P51784 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.96□□□□□ -1.3
USP11P51784 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.96□□□□□ -1.3
USP11P51784 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.96□□□□□ -1.3
USP11P51784 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.96□□□□□ -1.3
USP11P51784 AL353662.1-201ENST00000439099 327 ntBASIC6.96□□□□□ -1.3
USP11P51784 AC004865.1-201ENST00000442276 1003 ntBASIC6.96□□□□□ -1.3
USP11P51784 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.96□□□□□ -1.3
USP11P51784 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.96□□□□□ -1.3
USP11P51784 AL512593.1-201ENST00000444758 779 ntBASIC6.96□□□□□ -1.3
USP11P51784 RPL5P10-201ENST00000445207 894 ntBASIC6.96□□□□□ -1.3
USP11P51784 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.96□□□□□ -1.3
USP11P51784 RAB28P3-201ENST00000448325 597 ntBASIC6.96□□□□□ -1.3
USP11P51784 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.96□□□□□ -1.3
USP11P51784 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.96□□□□□ -1.3
USP11P51784 AC104971.1-201ENST00000495117 578 ntBASIC6.96□□□□□ -1.3
USP11P51784 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.96□□□□□ -1.3
USP11P51784 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.96□□□□□ -1.3
USP11P51784 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.96□□□□□ -1.3
USP11P51784 RN7SKP244-201ENST00000516513 307 ntBASIC6.96□□□□□ -1.3
USP11P51784 RN7SKP35-201ENST00000517210 151 ntBASIC6.96□□□□□ -1.3
USP11P51784 OR5AZ1P-201ENST00000527448 943 ntBASIC6.96□□□□□ -1.3
USP11P51784 GLYCAM1-201ENST00000546596 285 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms