Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA2P51587 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCA2P51587 NACA-203ENST00000454682 6629 ntTSL 5 BASIC4.94□□□□□ -1.62
BRCA2P51587 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA2P51587 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC4.94□□□□□ -1.62
BRCA2P51587 RN7SKP185-201ENST00000362813 326 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 AL035079.1-201ENST00000405210 287 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 RPL12P9-201ENST00000412942 488 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 NPM1P26-201ENST00000426339 738 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 TMX2P1-201ENST00000436507 708 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA2P51587 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA2P51587 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.94□□□□□ -1.62
BRCA2P51587 AC096553.1-201ENST00000605169 829 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
BRCA2P51587 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA2P51587 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA2P51587 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.94□□□□□ -1.62
BRCA2P51587 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA2P51587 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC4.94□□□□□ -1.62
BRCA2P51587 AC091286.1-201ENST00000431233 461 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 RPL7P33-201ENST00000444159 742 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 RPL7P49-201ENST00000471402 708 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 AC110768.1-201ENST00000509222 400 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 SNORA70.24-201ENST00000517233 118 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 CR392039.5-201ENST00000623201 510 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA2P51587 AC109446.4-201ENST00000623235 2755 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA2P51587 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA2P51587 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA2P51587 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.94□□□□□ -1.62
BRCA2P51587 AC007998.4-201ENST00000612496 2533 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.94□□□□□ -1.62
BRCA2P51587 TCEA1P4-201ENST00000415066 844 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA2P51587 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA2P51587 NOTCH2P1-201ENST00000443481 624 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.94□□□□□ -1.62
BRCA2P51587 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA2P51587 AC090181.2-201ENST00000602975 672 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.94□□□□□ -1.62
BRCA2P51587 AC099669.2-201ENST00000616549 437 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 AL138721.1-201ENST00000616756 179 ntBASIC4.94□□□□□ -1.62
BRCA2P51587 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.94□□□□□ -1.62
BRCA2P51587 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC4.94□□□□□ -1.62
BRCA2P51587 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
BRCA2P51587 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC4.93□□□□□ -1.62
BRCA2P51587 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC4.93□□□□□ -1.62
BRCA2P51587 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
BRCA2P51587 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.93□□□□□ -1.62
BRCA2P51587 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.93□□□□□ -1.62
BRCA2P51587 GTF2IP22-201ENST00000554443 182 ntBASIC4.93□□□□□ -1.62
BRCA2P51587 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 AC006042.3-201ENST00000454684 1469 ntBASIC4.93□□□□□ -1.62
BRCA2P51587 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.93□□□□□ -1.62
BRCA2P51587 NANOGP10-201ENST00000453325 895 ntBASIC4.93□□□□□ -1.62
BRCA2P51587 UBE2DNL-203ENST00000474922 222 ntBASIC4.93□□□□□ -1.62
BRCA2P51587 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.93□□□□□ -1.62
BRCA2P51587 OR8Q1P-201ENST00000526467 655 ntBASIC4.93□□□□□ -1.62
BRCA2P51587 AP001804.1-201ENST00000526868 919 ntBASIC4.93□□□□□ -1.62
BRCA2P51587 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.93□□□□□ -1.62
BRCA2P51587 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.93□□□□□ -1.62
BRCA2P51587 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
BRCA2P51587 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 AC008171.1-201ENST00000395058 200 ntBASIC4.93□□□□□ -1.62
BRCA2P51587 SNRPFP1-201ENST00000414761 252 ntBASIC4.93□□□□□ -1.62
BRCA2P51587 PSAT1P4-201ENST00000466500 526 ntBASIC4.93□□□□□ -1.62
BRCA2P51587 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA2P51587 AC018695.5-201ENST00000605872 315 ntBASIC4.93□□□□□ -1.62
BRCA2P51587 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.93□□□□□ -1.62
BRCA2P51587 ERG-202ENST00000398897 4651 ntTSL 5 BASIC4.93□□□□□ -1.62
BRCA2P51587 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA2P51587 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA2P51587 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA2P51587 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.92□□□□□ -1.62
BRCA2P51587 AL929601.4-201ENST00000613011 1341 ntBASIC4.92□□□□□ -1.62
BRCA2P51587 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA2P51587 RNA5SP360-201ENST00000516555 118 ntBASIC4.92□□□□□ -1.62
BRCA2P51587 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
BRCA2P51587 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
BRCA2P51587 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.92□□□□□ -1.62
BRCA2P51587 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA2P51587 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA2P51587 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA2P51587 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCA2P51587 AC004980.3-201ENST00000447046 365 ntBASIC4.92□□□□□ -1.62
BRCA2P51587 DUXAP2-201ENST00000519198 589 ntBASIC4.92□□□□□ -1.62
BRCA2P51587 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms