Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC073137.1-201ENST00000605636 634 ntBASIC5.58□□□□□ -1.52
NEDD4P46934 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.58□□□□□ -1.52
NEDD4P46934 AP003400.2-201ENST00000624036 666 ntBASIC5.58□□□□□ -1.52
NEDD4P46934 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.58□□□□□ -1.52
NEDD4P46934 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NEDD4P46934 AC073429.2-201ENST00000569694 1444 ntBASIC5.58□□□□□ -1.52
NEDD4P46934 CASC19-206ENST00000641028 1430 ntBASIC5.58□□□□□ -1.52
NEDD4P46934 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NEDD4P46934 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEDD4P46934 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NEDD4P46934 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.58□□□□□ -1.52
NEDD4P46934 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEDD4P46934 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEDD4P46934 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NEDD4P46934 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NEDD4P46934 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
NEDD4P46934 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NEDD4P46934 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.57□□□□□ -1.52
NEDD4P46934 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
NEDD4P46934 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NEDD4P46934 TRAV35-201ENST00000390462 330 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.57□□□□□ -1.52
NEDD4P46934 ATG4AP1-201ENST00000416893 538 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
NEDD4P46934 YY1P1-201ENST00000427625 668 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 AL772161.1-201ENST00000439130 476 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 AL591473.1-201ENST00000464297 313 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 RPL36AP41-201ENST00000493820 306 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.57□□□□□ -1.52
NEDD4P46934 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.57□□□□□ -1.52
NEDD4P46934 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.57□□□□□ -1.52
NEDD4P46934 BNIP3P1-201ENST00000547295 580 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.57□□□□□ -1.52
NEDD4P46934 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.57□□□□□ -1.52
NEDD4P46934 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.57□□□□□ -1.52
NEDD4P46934 AC010615.3-201ENST00000597319 394 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.57□□□□□ -1.52
NEDD4P46934 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.57□□□□□ -1.52
NEDD4P46934 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NEDD4P46934 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.57□□□□□ -1.52
NEDD4P46934 RBPJP2-201ENST00000618187 1444 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEDD4P46934 AL121950.1-201ENST00000624993 2077 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEDD4P46934 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
NEDD4P46934 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEDD4P46934 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEDD4P46934 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEDD4P46934 AC053481.2-202ENST00000582394 1500 ntBASIC5.57□□□□□ -1.52
NEDD4P46934 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.56□□□□□ -1.52
NEDD4P46934 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NEDD4P46934 AC240504.1-201ENST00000395709 845 ntBASIC5.56□□□□□ -1.52
NEDD4P46934 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.56□□□□□ -1.52
NEDD4P46934 AL591848.1-201ENST00000413092 322 ntBASIC5.56□□□□□ -1.52
NEDD4P46934 AL445487.1-201ENST00000415694 1580 ntBASIC5.56□□□□□ -1.52
NEDD4P46934 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.56□□□□□ -1.52
NEDD4P46934 AC016831.4-201ENST00000438302 307 ntBASIC5.56□□□□□ -1.52
NEDD4P46934 AC004938.1-201ENST00000438468 308 ntBASIC5.56□□□□□ -1.52
NEDD4P46934 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.56□□□□□ -1.52
NEDD4P46934 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.56□□□□□ -1.52
NEDD4P46934 AC068993.1-201ENST00000546724 589 ntBASIC5.56□□□□□ -1.52
NEDD4P46934 AC137768.1-201ENST00000549998 553 ntBASIC5.56□□□□□ -1.52
NEDD4P46934 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.56□□□□□ -1.52
NEDD4P46934 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.56□□□□□ -1.52
NEDD4P46934 OR51C1P-201ENST00000608504 942 ntBASIC5.56□□□□□ -1.52
NEDD4P46934 AL161616.1-201ENST00000611867 286 ntBASIC5.56□□□□□ -1.52
NEDD4P46934 NF1P10-201ENST00000613227 742 ntBASIC5.56□□□□□ -1.52
NEDD4P46934 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
NEDD4P46934 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
NEDD4P46934 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NEDD4P46934 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NEDD4P46934 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
NEDD4P46934 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
NEDD4P46934 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
NEDD4P46934 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
NEDD4P46934 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NEDD4P46934 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.55□□□□□ -1.52
NEDD4P46934 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.55□□□□□ -1.52
NEDD4P46934 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.55□□□□□ -1.52
NEDD4P46934 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.55□□□□□ -1.52
NEDD4P46934 NPM1P25-201ENST00000429734 854 ntBASIC5.55□□□□□ -1.52
NEDD4P46934 UBE2V2P3-201ENST00000433562 437 ntBASIC5.55□□□□□ -1.52
NEDD4P46934 AC073264.2-201ENST00000448886 166 ntBASIC5.55□□□□□ -1.52
NEDD4P46934 CEACAMP6-201ENST00000452007 574 ntBASIC5.55□□□□□ -1.52
NEDD4P46934 AC006967.1-201ENST00000467608 589 ntBASIC5.55□□□□□ -1.52
NEDD4P46934 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.55□□□□□ -1.52
NEDD4P46934 AC008897.1-201ENST00000494006 347 ntBASIC5.55□□□□□ -1.52
NEDD4P46934 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
NEDD4P46934 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.55□□□□□ -1.52
NEDD4P46934 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NEDD4P46934 AC093524.1-201ENST00000564266 1094 ntBASIC5.55□□□□□ -1.52
NEDD4P46934 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NEDD4P46934 RN7SL690P-201ENST00000582087 240 ntBASIC5.55□□□□□ -1.52
NEDD4P46934 AL583832.1-201ENST00000603227 784 ntBASIC5.55□□□□□ -1.52
NEDD4P46934 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.55□□□□□ -1.52
NEDD4P46934 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.55□□□□□ -1.52
NEDD4P46934 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
NEDD4P46934 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NEDD4P46934 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NEDD4P46934 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms