Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.14□□□□□ -1.59
ABCD3P28288 AC009962.1-201ENST00000567327 3813 ntBASIC5.14□□□□□ -1.59
ABCD3P28288 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
ABCD3P28288 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ABCD3P28288 AC004076.2-201ENST00000620532 3323 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC144833.1-201ENST00000567953 4089 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
ABCD3P28288 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ABCD3P28288 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ABCD3P28288 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ABCD3P28288 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.13□□□□□ -1.59
ABCD3P28288 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
ABCD3P28288 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.13□□□□□ -1.59
ABCD3P28288 NSRP1P1-201ENST00000444067 1693 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
ABCD3P28288 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.13□□□□□ -1.59
ABCD3P28288 OR52E6-202ENST00000379946 954 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 MIR551A-201ENST00000385042 96 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AL512422.1-201ENST00000407033 553 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 MIR1303-201ENST00000408625 86 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 MTND2P9-201ENST00000422293 931 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 CHEK2P5-201ENST00000423877 246 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.13□□□□□ -1.59
ABCD3P28288 AC073069.1-201ENST00000428657 441 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.13□□□□□ -1.59
ABCD3P28288 CDY14P-201ENST00000431260 1014 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.13□□□□□ -1.59
ABCD3P28288 OR6D1P-201ENST00000436165 939 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.13□□□□□ -1.59
ABCD3P28288 CDY12P-201ENST00000440679 1015 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC002542.1-201ENST00000440683 193 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.13□□□□□ -1.59
ABCD3P28288 CDY13P-201ENST00000445813 1015 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.13□□□□□ -1.59
ABCD3P28288 SEPT14P24-201ENST00000447236 180 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.13□□□□□ -1.59
ABCD3P28288 CDY23P-201ENST00000451661 1014 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 SNORD125-201ENST00000459538 96 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.13□□□□□ -1.59
ABCD3P28288 RN7SL101P-201ENST00000496350 279 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.13□□□□□ -1.59
ABCD3P28288 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.13□□□□□ -1.59
ABCD3P28288 AC069306.1-201ENST00000507006 843 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC111000.6-201ENST00000514471 709 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 IGKV2-36-201ENST00000519999 223 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC010376.1-201ENST00000522101 334 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.13□□□□□ -1.59
ABCD3P28288 AC122688.1-201ENST00000541494 223 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.13□□□□□ -1.59
ABCD3P28288 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.13□□□□□ -1.59
ABCD3P28288 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.13□□□□□ -1.59
ABCD3P28288 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.13□□□□□ -1.59
ABCD3P28288 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.13□□□□□ -1.59
ABCD3P28288 VN1R87P-201ENST00000596706 487 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC012616.1-201ENST00000600294 197 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.13□□□□□ -1.59
ABCD3P28288 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC138965.3-201ENST00000623875 498 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC116563.2-201ENST00000624751 535 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.13□□□□□ -1.59
ABCD3P28288 LINC01808-202ENST00000641680 1116 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 AC079776.5-201ENST00000641920 211 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.13□□□□□ -1.59
ABCD3P28288 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ABCD3P28288 AL627171.1-201ENST00000618845 1308 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ABCD3P28288 AC093849.1-201ENST00000563631 2209 ntBASIC5.13□□□□□ -1.59
ABCD3P28288 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.13□□□□□ -1.59
ABCD3P28288 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ABCD3P28288 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
ABCD3P28288 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
ABCD3P28288 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
ABCD3P28288 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ABCD3P28288 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.12□□□□□ -1.59
ABCD3P28288 RNU6-1339P-201ENST00000363574 91 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 RN7SKP124-201ENST00000364730 341 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 RN7SKP6-201ENST00000364795 319 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 RNU4-2-201ENST00000365668 141 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 RNA5SP187-201ENST00000384400 119 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 SNORD65C-201ENST00000390962 71 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 VN1R51P-201ENST00000411675 945 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.12□□□□□ -1.59
ABCD3P28288 AL513325.1-201ENST00000417716 1034 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 AC007161.1-204ENST00000423039 460 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 NAP1L4P2-201ENST00000425958 899 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ABCD3P28288 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC092447.2-201ENST00000435487 669 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 AL390119.1-201ENST00000440329 312 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 AC019185.1-201ENST00000442718 389 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 TPTE2P6-202ENST00000445572 1007 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms