Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
NID1P14543 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
NID1P14543 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NID1P14543 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.52□□□□□ -1.37
NID1P14543 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.52□□□□□ -1.37
NID1P14543 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.52□□□□□ -1.37
NID1P14543 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 RPL12P13-201ENST00000310055 497 ntBASIC6.52□□□□□ -1.37
NID1P14543 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.52□□□□□ -1.37
NID1P14543 RNU4-81P-201ENST00000363561 144 ntBASIC6.52□□□□□ -1.37
NID1P14543 RNA5SP302-201ENST00000364896 100 ntBASIC6.52□□□□□ -1.37
NID1P14543 RNA5SP172-201ENST00000365061 118 ntBASIC6.52□□□□□ -1.37
NID1P14543 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.52□□□□□ -1.37
NID1P14543 AL672167.2-201ENST00000377164 879 ntBASIC6.52□□□□□ -1.37
NID1P14543 RNU6-474P-201ENST00000384243 107 ntBASIC6.52□□□□□ -1.37
NID1P14543 RNU6-1105P-201ENST00000384774 107 ntBASIC6.52□□□□□ -1.37
NID1P14543 MIR16-1-201ENST00000385271 89 ntBASIC6.52□□□□□ -1.37
NID1P14543 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 RN7SKP29-201ENST00000410957 272 ntBASIC6.52□□□□□ -1.37
NID1P14543 RNU6-373P-201ENST00000411247 98 ntBASIC6.52□□□□□ -1.37
NID1P14543 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.52□□□□□ -1.37
NID1P14543 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.52□□□□□ -1.37
NID1P14543 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.52□□□□□ -1.37
NID1P14543 MTCO2P5-201ENST00000422621 426 ntBASIC6.52□□□□□ -1.37
NID1P14543 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.52□□□□□ -1.37
NID1P14543 ISCA1P6-201ENST00000427740 390 ntBASIC6.52□□□□□ -1.37
NID1P14543 AC007559.1-201ENST00000428736 355 ntBASIC6.52□□□□□ -1.37
NID1P14543 AC005033.1-201ENST00000428904 813 ntBASIC6.52□□□□□ -1.37
NID1P14543 BMS1P19-201ENST00000433925 393 ntBASIC6.52□□□□□ -1.37
NID1P14543 PHB2P1-201ENST00000434943 890 ntBASIC6.52□□□□□ -1.37
NID1P14543 AL353093.1-201ENST00000441292 436 ntBASIC6.52□□□□□ -1.37
NID1P14543 SDHCP3-201ENST00000445371 506 ntBASIC6.52□□□□□ -1.37
NID1P14543 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.52□□□□□ -1.37
NID1P14543 AC019080.2-201ENST00000453859 394 ntBASIC6.52□□□□□ -1.37
NID1P14543 DHFRP3-201ENST00000455595 559 ntBASIC6.52□□□□□ -1.37
NID1P14543 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.52□□□□□ -1.37
NID1P14543 SNORA35.1-201ENST00000458908 128 ntBASIC6.52□□□□□ -1.37
NID1P14543 RN7SL834P-201ENST00000461450 286 ntBASIC6.52□□□□□ -1.37
NID1P14543 AC095057.1-201ENST00000507583 168 ntBASIC6.52□□□□□ -1.37
NID1P14543 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.52□□□□□ -1.37
NID1P14543 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.52□□□□□ -1.37
NID1P14543 MTND5P4-201ENST00000514978 288 ntBASIC6.52□□□□□ -1.37
NID1P14543 AP005902.2-201ENST00000518393 307 ntBASIC6.52□□□□□ -1.37
NID1P14543 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.52□□□□□ -1.37
NID1P14543 GLYATL1P4-201ENST00000529326 906 ntBASIC6.52□□□□□ -1.37
NID1P14543 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.52□□□□□ -1.37
NID1P14543 AL031846.1-201ENST00000560933 314 ntBASIC6.52□□□□□ -1.37
NID1P14543 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.52□□□□□ -1.37
NID1P14543 ZNF322P1-201ENST00000568013 1209 ntBASIC6.52□□□□□ -1.37
NID1P14543 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.52□□□□□ -1.37
NID1P14543 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.52□□□□□ -1.37
NID1P14543 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
NID1P14543 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.52□□□□□ -1.37
NID1P14543 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 AC008638.3-201ENST00000603341 463 ntBASIC6.52□□□□□ -1.37
NID1P14543 AC019193.3-201ENST00000609144 554 ntBASIC6.52□□□□□ -1.37
NID1P14543 C2orf27A-204ENST00000623058 969 ntBASIC6.52□□□□□ -1.37
NID1P14543 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.52□□□□□ -1.37
NID1P14543 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.52□□□□□ -1.37
NID1P14543 AP002833.3-201ENST00000625075 2265 ntBASIC6.52□□□□□ -1.37
NID1P14543 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.52□□□□□ -1.37
NID1P14543 CDR1-202ENST00000625883 1485 ntBASIC6.52□□□□□ -1.37
NID1P14543 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.52□□□□□ -1.37
NID1P14543 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.52□□□□□ -1.37
NID1P14543 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.52□□□□□ -1.37
NID1P14543 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NID1P14543 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
NID1P14543 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.51□□□□□ -1.37
NID1P14543 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NID1P14543 AC125232.1-201ENST00000452554 1408 ntBASIC6.51□□□□□ -1.37
NID1P14543 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.51□□□□□ -1.37
NID1P14543 OR2AH1P-202ENST00000641232 2744 ntBASIC6.51□□□□□ -1.37
NID1P14543 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.51□□□□□ -1.37
NID1P14543 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NID1P14543 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.51□□□□□ -1.37
NID1P14543 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NID1P14543 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NID1P14543 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
NID1P14543 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.51□□□□□ -1.37
NID1P14543 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.51□□□□□ -1.37
NID1P14543 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
NID1P14543 AC092821.2-201ENST00000545710 2042 ntBASIC6.51□□□□□ -1.37
NID1P14543 OR4A15-201ENST00000314706 1035 ntBASIC6.51□□□□□ -1.37
NID1P14543 RNA5SP429-201ENST00000363688 109 ntBASIC6.51□□□□□ -1.37
NID1P14543 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NID1P14543 AL603908.1-201ENST00000406098 201 ntBASIC6.51□□□□□ -1.37
NID1P14543 RNU6-195P-201ENST00000411352 109 ntBASIC6.51□□□□□ -1.37
NID1P14543 PPIAP23-201ENST00000420099 497 ntBASIC6.51□□□□□ -1.37
NID1P14543 MTCO3P46-201ENST00000425787 232 ntBASIC6.51□□□□□ -1.37
NID1P14543 AF274573.1-201ENST00000430535 494 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms