Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ITGA4P13612 CASC19-206ENST00000641028 1430 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ITGA4P13612 OR10R3P-201ENST00000361688 942 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 RNU6-560P-201ENST00000364007 108 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.54□□□□□ -1.36
ITGA4P13612 RNU6-244P-201ENST00000391028 104 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 SNORA17A-201ENST00000391185 133 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.54□□□□□ -1.36
ITGA4P13612 AL390774.1-201ENST00000411924 246 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AC245060.4-201ENST00000413293 1121 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 NPM1P11-201ENST00000417106 855 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.54□□□□□ -1.36
ITGA4P13612 AL139421.1-201ENST00000423010 169 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.54□□□□□ -1.36
ITGA4P13612 BX323845.3-201ENST00000428215 527 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.54□□□□□ -1.36
ITGA4P13612 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.54□□□□□ -1.36
ITGA4P13612 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.54□□□□□ -1.36
ITGA4P13612 AL391987.1-201ENST00000441025 200 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.54□□□□□ -1.36
ITGA4P13612 RPL21P134-201ENST00000453468 483 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 GEMIN2P1-201ENST00000454246 752 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AC112187.1-201ENST00000455837 479 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 RPL23AP37-201ENST00000479658 549 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 GAPDHP36-201ENST00000480688 918 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.54□□□□□ -1.36
ITGA4P13612 AC005178.1-201ENST00000508392 440 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 RNU2-30P-201ENST00000516209 141 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ITGA4P13612 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.54□□□□□ -1.36
ITGA4P13612 PCNAP4-201ENST00000532690 730 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 UBE2NP1-201ENST00000545592 458 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.54□□□□□ -1.36
ITGA4P13612 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.54□□□□□ -1.36
ITGA4P13612 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.54□□□□□ -1.36
ITGA4P13612 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.54□□□□□ -1.36
ITGA4P13612 ZNF322P1-201ENST00000568013 1209 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 MIR4801-201ENST00000582704 82 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.54□□□□□ -1.36
ITGA4P13612 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.54□□□□□ -1.36
ITGA4P13612 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
ITGA4P13612 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.54□□□□□ -1.36
ITGA4P13612 AP000238.1-201ENST00000608759 426 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AL021918.2-201ENST00000613415 194 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AL138960.1-201ENST00000613838 513 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AC099842.1-201ENST00000619919 596 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AC022509.4-201ENST00000621404 572 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AC127024.6-201ENST00000621598 424 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.54□□□□□ -1.36
ITGA4P13612 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.54□□□□□ -1.36
ITGA4P13612 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
ITGA4P13612 SNORA17.5-201ENST00000630429 132 ntBASIC6.54□□□□□ -1.36
ITGA4P13612 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ITGA4P13612 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.54□□□□□ -1.36
ITGA4P13612 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ITGA4P13612 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ITGA4P13612 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.54□□□□□ -1.36
ITGA4P13612 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
ITGA4P13612 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.54□□□□□ -1.36
ITGA4P13612 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.54□□□□□ -1.36
ITGA4P13612 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ITGA4P13612 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ITGA4P13612 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.53□□□□□ -1.36
ITGA4P13612 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
ITGA4P13612 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ITGA4P13612 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ITGA4P13612 MAPK10-270ENST00000641102 3538 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
ITGA4P13612 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ITGA4P13612 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ITGA4P13612 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ITGA4P13612 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ITGA4P13612 RN7SKP69-201ENST00000365390 305 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 RN7SKP81-201ENST00000365603 331 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ITGA4P13612 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
ITGA4P13612 AL031577.2-201ENST00000404133 280 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 RN7SKP273-201ENST00000411392 314 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.53□□□□□ -1.36
ITGA4P13612 UBE2V1P10-201ENST00000414685 269 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 RAD23BP2-201ENST00000416003 1207 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC6.53□□□□□ -1.36
ITGA4P13612 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.53□□□□□ -1.36
ITGA4P13612 AC234064.1-201ENST00000436312 247 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 AC002542.1-201ENST00000440683 193 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 BMS1P10-201ENST00000443754 1120 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 AC005002.1-201ENST00000447458 540 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.53□□□□□ -1.36
ITGA4P13612 NXT1P1-201ENST00000458481 316 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 AC091959.2-201ENST00000477363 321 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 AC109927.2-201ENST00000506416 303 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.53□□□□□ -1.36
ITGA4P13612 AC008837.2-201ENST00000513076 418 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 Y_RNA.695-201ENST00000516715 107 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 NDUFA5P2-201ENST00000519723 344 ntBASIC6.53□□□□□ -1.36
ITGA4P13612 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.53□□□□□ -1.36
ITGA4P13612 AP000648.1-201ENST00000529682 397 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms