Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH1P12830 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDH1P12830 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH1P12830 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH1P12830 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH1P12830 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CDH1P12830 AC133552.1-201ENST00000569988 4007 ntBASIC5.03□□□□□ -1.6
CDH1P12830 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
CDH1P12830 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 U3.3-201ENST00000362986 216 ntBASIC5.03□□□□□ -1.6
CDH1P12830 RNU6-792P-201ENST00000363490 107 ntBASIC5.03□□□□□ -1.6
CDH1P12830 RNA5SP90-201ENST00000364801 99 ntBASIC5.03□□□□□ -1.6
CDH1P12830 RNU6-650P-201ENST00000365658 111 ntBASIC5.03□□□□□ -1.6
CDH1P12830 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 RPL10P10-201ENST00000403509 664 ntBASIC5.03□□□□□ -1.6
CDH1P12830 MIR1286-201ENST00000408112 78 ntBASIC5.03□□□□□ -1.6
CDH1P12830 RNA5SP296-201ENST00000410523 111 ntBASIC5.03□□□□□ -1.6
CDH1P12830 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH1P12830 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH1P12830 MTCO2P1-201ENST00000424648 477 ntBASIC5.03□□□□□ -1.6
CDH1P12830 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH1P12830 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH1P12830 NANOGP4-201ENST00000427230 913 ntBASIC5.03□□□□□ -1.6
CDH1P12830 AL512637.2-201ENST00000431287 1256 ntBASIC5.03□□□□□ -1.6
CDH1P12830 MRPL50P1-201ENST00000431951 384 ntBASIC5.03□□□□□ -1.6
CDH1P12830 AL161722.2-201ENST00000434731 981 ntBASIC5.03□□□□□ -1.6
CDH1P12830 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.03□□□□□ -1.6
CDH1P12830 OR52B5P-201ENST00000435337 951 ntBASIC5.03□□□□□ -1.6
CDH1P12830 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH1P12830 RPS29P10-201ENST00000439197 166 ntBASIC5.03□□□□□ -1.6
CDH1P12830 RAB28P3-201ENST00000448325 597 ntBASIC5.03□□□□□ -1.6
CDH1P12830 CLIC4P1-201ENST00000453177 535 ntBASIC5.03□□□□□ -1.6
CDH1P12830 MTND2P6-201ENST00000455337 1030 ntBASIC5.03□□□□□ -1.6
CDH1P12830 RPS26P39-201ENST00000469206 341 ntBASIC5.03□□□□□ -1.6
CDH1P12830 COPS8P2-201ENST00000473228 627 ntBASIC5.03□□□□□ -1.6
CDH1P12830 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 GTF2F2P1-201ENST00000511083 675 ntBASIC5.03□□□□□ -1.6
CDH1P12830 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH1P12830 AC067904.2-201ENST00000517322 1283 ntBASIC5.03□□□□□ -1.6
CDH1P12830 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH1P12830 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CDH1P12830 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH1P12830 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH1P12830 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.03□□□□□ -1.6
CDH1P12830 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.03□□□□□ -1.6
CDH1P12830 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH1P12830 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH1P12830 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH1P12830 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH1P12830 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH1P12830 AL512329.2-201ENST00000607350 548 ntBASIC5.03□□□□□ -1.6
CDH1P12830 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH1P12830 AC091046.2-201ENST00000620775 665 ntBASIC5.03□□□□□ -1.6
CDH1P12830 AP000648.2-201ENST00000624182 404 ntBASIC5.03□□□□□ -1.6
CDH1P12830 OR52B5P-202ENST00000641118 1110 ntBASIC5.03□□□□□ -1.6
CDH1P12830 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH1P12830 AC083843.2-201ENST00000568248 6253 ntBASIC5.03□□□□□ -1.6
CDH1P12830 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH1P12830 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH1P12830 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH1P12830 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CDH1P12830 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CDH1P12830 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
CDH1P12830 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH1P12830 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH1P12830 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH1P12830 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDH1P12830 RNU1-43P-201ENST00000365052 165 ntBASIC5.02□□□□□ -1.61
CDH1P12830 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH1P12830 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH1P12830 RN7SKP16-201ENST00000410180 299 ntBASIC5.02□□□□□ -1.61
CDH1P12830 RN7SKP229-201ENST00000410465 302 ntBASIC5.02□□□□□ -1.61
CDH1P12830 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH1P12830 AC092570.3-201ENST00000420113 693 ntBASIC5.02□□□□□ -1.61
CDH1P12830 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH1P12830 EI24P4-201ENST00000423683 1078 ntBASIC5.02□□□□□ -1.61
CDH1P12830 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH1P12830 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH1P12830 GAPDHP58-201ENST00000438477 1006 ntBASIC5.02□□□□□ -1.61
CDH1P12830 AC245047.2-201ENST00000441060 530 ntBASIC5.02□□□□□ -1.61
CDH1P12830 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH1P12830 OR2AF1P-201ENST00000454899 889 ntBASIC5.02□□□□□ -1.61
CDH1P12830 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH1P12830 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH1P12830 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH1P12830 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH1P12830 STRADBP1-201ENST00000478954 1281 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms