Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RETP07949 RPL10P10-201ENST00000403509 664 ntBASIC5.12□□□□□ -1.59
RETP07949 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.12□□□□□ -1.59
RETP07949 AC013410.1-201ENST00000436223 1232 ntBASIC5.12□□□□□ -1.59
RETP07949 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.12□□□□□ -1.59
RETP07949 RBMY2TP-201ENST00000451162 947 ntBASIC5.12□□□□□ -1.59
RETP07949 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.12□□□□□ -1.59
RETP07949 USP9YP2-201ENST00000504503 1000 ntBASIC5.12□□□□□ -1.59
RETP07949 AC111000.3-201ENST00000508057 576 ntBASIC5.12□□□□□ -1.59
RETP07949 USP9YP1-201ENST00000513521 1002 ntBASIC5.12□□□□□ -1.59
RETP07949 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.12□□□□□ -1.59
RETP07949 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.12□□□□□ -1.59
RETP07949 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.12□□□□□ -1.59
RETP07949 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.12□□□□□ -1.59
RETP07949 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.12□□□□□ -1.59
RETP07949 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.12□□□□□ -1.59
RETP07949 TVP23CP2-201ENST00000571473 623 ntBASIC5.12□□□□□ -1.59
RETP07949 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.12□□□□□ -1.59
RETP07949 BNIP3P33-201ENST00000598912 569 ntBASIC5.12□□□□□ -1.59
RETP07949 AL512782.1-201ENST00000603093 364 ntBASIC5.12□□□□□ -1.59
RETP07949 AL445423.1-201ENST00000609941 536 ntBASIC5.12□□□□□ -1.59
RETP07949 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.12□□□□□ -1.59
RETP07949 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RETP07949 Z98755.1-201ENST00000407015 1384 ntBASIC5.12□□□□□ -1.59
RETP07949 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RETP07949 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RETP07949 AC079298.1-201ENST00000625026 1619 ntBASIC5.12□□□□□ -1.59
RETP07949 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.12□□□□□ -1.59
RETP07949 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 AC093909.5-201ENST00000621839 1799 ntBASIC5.11□□□□□ -1.59
RETP07949 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.11□□□□□ -1.59
RETP07949 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.11□□□□□ -1.59
RETP07949 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.11□□□□□ -1.59
RETP07949 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RETP07949 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 RNA5SP479-201ENST00000364858 117 ntBASIC5.11□□□□□ -1.59
RETP07949 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RETP07949 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 SNORA66-201ENST00000384792 133 ntBASIC5.11□□□□□ -1.59
RETP07949 OR8V1P-201ENST00000395193 873 ntBASIC5.11□□□□□ -1.59
RETP07949 MIR1193-201ENST00000408109 78 ntBASIC5.11□□□□□ -1.59
RETP07949 RPL12P9-201ENST00000412942 488 ntBASIC5.11□□□□□ -1.59
RETP07949 PCNPP4-201ENST00000414817 517 ntBASIC5.11□□□□□ -1.59
RETP07949 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.11□□□□□ -1.59
RETP07949 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.11□□□□□ -1.59
RETP07949 TMX2P1-201ENST00000436507 708 ntBASIC5.11□□□□□ -1.59
RETP07949 NPM1P33-201ENST00000438918 872 ntBASIC5.11□□□□□ -1.59
RETP07949 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.11□□□□□ -1.59
RETP07949 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.11□□□□□ -1.59
RETP07949 SERPINA7P1-201ENST00000443077 631 ntBASIC5.11□□□□□ -1.59
RETP07949 TXNP2-201ENST00000443918 295 ntBASIC5.11□□□□□ -1.59
RETP07949 RN7SL319P-201ENST00000480656 221 ntBASIC5.11□□□□□ -1.59
RETP07949 RN7SKP122-201ENST00000515923 296 ntBASIC5.11□□□□□ -1.59
RETP07949 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.11□□□□□ -1.59
RETP07949 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.11□□□□□ -1.59
RETP07949 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.11□□□□□ -1.59
RETP07949 AC022360.1-201ENST00000521058 340 ntBASIC5.11□□□□□ -1.59
RETP07949 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.11□□□□□ -1.59
RETP07949 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.11□□□□□ -1.59
RETP07949 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.11□□□□□ -1.59
RETP07949 NMNAT1P1-201ENST00000554095 876 ntBASIC5.11□□□□□ -1.59
RETP07949 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 BNIP3P22-201ENST00000593399 556 ntBASIC5.11□□□□□ -1.59
RETP07949 AP001521.2-201ENST00000608772 546 ntBASIC5.11□□□□□ -1.59
RETP07949 AC244107.2-201ENST00000611773 76 ntBASIC5.11□□□□□ -1.59
RETP07949 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 AC092111.2-201ENST00000611627 1414 ntBASIC5.11□□□□□ -1.59
RETP07949 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.11□□□□□ -1.59
RETP07949 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.11□□□□□ -1.59
RETP07949 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RETP07949 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RETP07949 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.1□□□□□ -1.59
RETP07949 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RETP07949 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.1□□□□□ -1.59
RETP07949 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RETP07949 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RETP07949 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RETP07949 RNA5SP90-201ENST00000364801 99 ntBASIC5.1□□□□□ -1.59
RETP07949 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RETP07949 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RETP07949 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RETP07949 RPS27AP7-201ENST00000422792 455 ntBASIC5.1□□□□□ -1.59
RETP07949 AC124944.2-201ENST00000429866 1242 ntBASIC5.1□□□□□ -1.59
RETP07949 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RETP07949 AC090018.1-201ENST00000434369 367 ntBASIC5.1□□□□□ -1.59
RETP07949 AL137845.2-201ENST00000444292 988 ntBASIC5.1□□□□□ -1.59
RETP07949 RPS6P2-201ENST00000454208 705 ntBASIC5.1□□□□□ -1.59
RETP07949 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms