Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TBCAP2-201ENST00000416175 326 ntBASIC3.98□□□□□ -1.77
CTSDP07339 RPL7P57-201ENST00000423238 740 ntBASIC3.98□□□□□ -1.77
CTSDP07339 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSDP07339 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.98□□□□□ -1.77
CTSDP07339 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.98□□□□□ -1.77
CTSDP07339 ATP5G1P3-201ENST00000463301 410 ntBASIC3.98□□□□□ -1.77
CTSDP07339 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTSDP07339 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTSDP07339 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.98□□□□□ -1.77
CTSDP07339 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
CTSDP07339 AL358913.1-201ENST00000554342 121 ntBASIC3.98□□□□□ -1.77
CTSDP07339 AC004825.1-201ENST00000555068 586 ntBASIC3.98□□□□□ -1.77
CTSDP07339 AC209154.1-201ENST00000582156 337 ntBASIC3.98□□□□□ -1.77
CTSDP07339 AP000919.1-201ENST00000582850 985 ntBASIC3.98□□□□□ -1.77
CTSDP07339 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.98□□□□□ -1.77
CTSDP07339 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSDP07339 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSDP07339 AC022467.1-201ENST00000614738 749 ntBASIC3.98□□□□□ -1.77
CTSDP07339 AC008115.4-201ENST00000619780 775 ntBASIC3.98□□□□□ -1.77
CTSDP07339 AC011815.3-201ENST00000624194 473 ntBASIC3.98□□□□□ -1.77
CTSDP07339 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTSDP07339 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTSDP07339 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTSDP07339 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTSDP07339 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.98□□□□□ -1.77
CTSDP07339 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.98□□□□□ -1.77
CTSDP07339 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.98□□□□□ -1.77
CTSDP07339 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CTSDP07339 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTSDP07339 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.98□□□□□ -1.77
CTSDP07339 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.98□□□□□ -1.77
CTSDP07339 HCFC2P1-201ENST00000392864 1592 ntBASIC3.97□□□□□ -1.77
CTSDP07339 AC017104.4-201ENST00000636283 1592 ntBASIC3.97□□□□□ -1.77
CTSDP07339 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.97□□□□□ -1.77
CTSDP07339 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CTSDP07339 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 AC011493.1-201ENST00000596753 1632 ntBASIC3.97□□□□□ -1.77
CTSDP07339 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 SNORA51.1-201ENST00000363243 140 ntBASIC3.97□□□□□ -1.77
CTSDP07339 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 MIR1286-201ENST00000408112 78 ntBASIC3.97□□□□□ -1.77
CTSDP07339 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.97□□□□□ -1.77
CTSDP07339 AP000534.2-201ENST00000412729 568 ntBASIC3.97□□□□□ -1.77
CTSDP07339 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 AC005033.1-201ENST00000428904 813 ntBASIC3.97□□□□□ -1.77
CTSDP07339 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.97□□□□□ -1.77
CTSDP07339 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.97□□□□□ -1.77
CTSDP07339 AC116562.1-201ENST00000485355 781 ntBASIC3.97□□□□□ -1.77
CTSDP07339 PGAM1P13-201ENST00000507497 754 ntBASIC3.97□□□□□ -1.77
CTSDP07339 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.97□□□□□ -1.77
CTSDP07339 RNA5SP392-201ENST00000516905 112 ntBASIC3.97□□□□□ -1.77
CTSDP07339 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.97□□□□□ -1.77
CTSDP07339 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.97□□□□□ -1.77
CTSDP07339 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.97□□□□□ -1.77
CTSDP07339 AC015912.2-201ENST00000571053 181 ntBASIC3.97□□□□□ -1.77
CTSDP07339 MIR4489-201ENST00000578869 62 ntBASIC3.97□□□□□ -1.77
CTSDP07339 AP005119.2-201ENST00000579735 1105 ntBASIC3.97□□□□□ -1.77
CTSDP07339 HMGB2P1-201ENST00000591146 634 ntBASIC3.97□□□□□ -1.77
CTSDP07339 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.97□□□□□ -1.77
CTSDP07339 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.97□□□□□ -1.77
CTSDP07339 AC124856.1-201ENST00000600819 896 ntBASIC3.97□□□□□ -1.77
CTSDP07339 IMMP1LP3-201ENST00000604197 224 ntBASIC3.97□□□□□ -1.77
CTSDP07339 AC010424.2-201ENST00000607594 443 ntBASIC3.97□□□□□ -1.77
CTSDP07339 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.97□□□□□ -1.77
CTSDP07339 AP002505.2-201ENST00000623585 696 ntBASIC3.97□□□□□ -1.77
CTSDP07339 AL353662.3-201ENST00000625131 237 ntBASIC3.97□□□□□ -1.77
CTSDP07339 AL355480.1-201ENST00000629041 99 ntBASIC3.97□□□□□ -1.77
CTSDP07339 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CTSDP07339 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.97□□□□□ -1.77
CTSDP07339 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTSDP07339 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CTSDP07339 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CTSDP07339 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
CTSDP07339 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.96□□□□□ -1.77
CTSDP07339 IRF5P1-201ENST00000504852 2164 ntBASIC3.96□□□□□ -1.78
CTSDP07339 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.96□□□□□ -1.78
CTSDP07339 AC087190.4-201ENST00000574616 8334 ntBASIC3.96□□□□□ -1.78
CTSDP07339 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTSDP07339 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CTSDP07339 DDX18P3-201ENST00000404856 2007 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CTSDP07339 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CTSDP07339 RNU1-108P-201ENST00000362556 161 ntBASIC3.96□□□□□ -1.78
CTSDP07339 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTSDP07339 SNORA79B-201ENST00000410557 148 ntBASIC3.96□□□□□ -1.78
CTSDP07339 RN7SKP126-201ENST00000411143 300 ntBASIC3.96□□□□□ -1.78
CTSDP07339 EIF4EP1-201ENST00000422311 642 ntBASIC3.96□□□□□ -1.78
CTSDP07339 GTF2IP2-201ENST00000424290 697 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.96□□□□□ -1.78
CTSDP07339 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.96□□□□□ -1.78
CTSDP07339 RPS17P8-201ENST00000434525 335 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms