Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.53□□□□□ -1.52
RB1P06400 AL512310.9-201ENST00000553311 948 ntBASIC5.53□□□□□ -1.52
RB1P06400 NMNAT1P1-201ENST00000554095 876 ntBASIC5.53□□□□□ -1.52
RB1P06400 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.53□□□□□ -1.52
RB1P06400 AC242628.1-201ENST00000606810 391 ntBASIC5.53□□□□□ -1.52
RB1P06400 RNA5SP439-201ENST00000617595 124 ntBASIC5.53□□□□□ -1.52
RB1P06400 AC005618.4-201ENST00000625053 554 ntBASIC5.53□□□□□ -1.52
RB1P06400 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.53□□□□□ -1.52
RB1P06400 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.53□□□□□ -1.52
RB1P06400 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.53□□□□□ -1.52
RB1P06400 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 AC083899.1-201ENST00000454465 3819 ntBASIC5.53□□□□□ -1.52
RB1P06400 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.53□□□□□ -1.52
RB1P06400 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.53□□□□□ -1.52
RB1P06400 SMG1P7-201ENST00000565246 2704 ntBASIC5.53□□□□□ -1.52
RB1P06400 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RB1P06400 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.52□□□□□ -1.53
RB1P06400 AC011933.2-201ENST00000578539 2790 ntBASIC5.52□□□□□ -1.53
RB1P06400 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RB1P06400 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
RB1P06400 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.52□□□□□ -1.53
RB1P06400 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.52□□□□□ -1.53
RB1P06400 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.52□□□□□ -1.53
RB1P06400 AC007559.1-201ENST00000428736 355 ntBASIC5.52□□□□□ -1.53
RB1P06400 RPL17P35-201ENST00000432217 549 ntBASIC5.52□□□□□ -1.53
RB1P06400 ZNF965P-201ENST00000432501 817 ntBASIC5.52□□□□□ -1.53
RB1P06400 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.52□□□□□ -1.53
RB1P06400 AC093716.1-201ENST00000435923 377 ntBASIC5.52□□□□□ -1.53
RB1P06400 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.52□□□□□ -1.53
RB1P06400 RPL34P20-201ENST00000442771 351 ntBASIC5.52□□□□□ -1.53
RB1P06400 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.52□□□□□ -1.53
RB1P06400 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.52□□□□□ -1.53
RB1P06400 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.52□□□□□ -1.53
RB1P06400 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.52□□□□□ -1.53
RB1P06400 RPL5P13-201ENST00000462840 709 ntBASIC5.52□□□□□ -1.53
RB1P06400 AC063943.1-201ENST00000465434 453 ntBASIC5.52□□□□□ -1.53
RB1P06400 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.52□□□□□ -1.53
RB1P06400 OR9N1P-202ENST00000494289 481 ntBASIC5.52□□□□□ -1.53
RB1P06400 AC091912.1-201ENST00000511351 248 ntBASIC5.52□□□□□ -1.53
RB1P06400 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.52□□□□□ -1.53
RB1P06400 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.52□□□□□ -1.53
RB1P06400 OR8Q1P-201ENST00000526467 655 ntBASIC5.52□□□□□ -1.53
RB1P06400 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.52□□□□□ -1.53
RB1P06400 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.52□□□□□ -1.53
RB1P06400 AC209154.1-201ENST00000582156 337 ntBASIC5.52□□□□□ -1.53
RB1P06400 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RB1P06400 AL162431.4-201ENST00000604674 411 ntBASIC5.52□□□□□ -1.53
RB1P06400 AL391358.1-201ENST00000605342 190 ntBASIC5.52□□□□□ -1.53
RB1P06400 AP001521.2-201ENST00000608772 546 ntBASIC5.52□□□□□ -1.53
RB1P06400 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.52□□□□□ -1.53
RB1P06400 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.52□□□□□ -1.53
RB1P06400 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RB1P06400 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.52□□□□□ -1.53
RB1P06400 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RB1P06400 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RB1P06400 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RB1P06400 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RB1P06400 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.52□□□□□ -1.53
RB1P06400 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RB1P06400 AL031595.2-201ENST00000624215 19071 ntBASIC5.51□□□□□ -1.53
RB1P06400 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RB1P06400 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RB1P06400 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RB1P06400 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RB1P06400 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
RB1P06400 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RB1P06400 AC003973.3-201ENST00000624863 2822 ntBASIC5.51□□□□□ -1.53
RB1P06400 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.51□□□□□ -1.53
RB1P06400 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RB1P06400 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RB1P06400 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RB1P06400 SNORA66-201ENST00000384792 133 ntBASIC5.51□□□□□ -1.53
RB1P06400 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RB1P06400 EI24P3-201ENST00000399046 1062 ntBASIC5.51□□□□□ -1.53
RB1P06400 Z86062.1-201ENST00000406773 777 ntBASIC5.51□□□□□ -1.53
RB1P06400 RPL26P37-201ENST00000411983 438 ntBASIC5.51□□□□□ -1.53
RB1P06400 AL158827.1-201ENST00000416300 391 ntBASIC5.51□□□□□ -1.53
RB1P06400 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
RB1P06400 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.51□□□□□ -1.53
RB1P06400 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.51□□□□□ -1.53
RB1P06400 MTND2P30-201ENST00000456663 382 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC107015.1-201ENST00000466902 747 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC006967.1-201ENST00000467608 589 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC093663.2-201ENST00000484625 313 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms