Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL4A1P02462 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL4A1P02462 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL4A1P02462 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.57□□□□□ -1.52
COL4A1P02462 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.57□□□□□ -1.52
COL4A1P02462 UBBP2-201ENST00000376781 231 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 RPS27AP11-201ENST00000402798 447 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.56□□□□□ -1.52
COL4A1P02462 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.56□□□□□ -1.52
COL4A1P02462 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.56□□□□□ -1.52
COL4A1P02462 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A1P02462 AC239367.2-201ENST00000447309 705 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AL162591.2-201ENST00000449634 317 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.56□□□□□ -1.52
COL4A1P02462 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.56□□□□□ -1.52
COL4A1P02462 AP000619.2-201ENST00000546014 969 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AC025884.1-201ENST00000556034 378 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A1P02462 AC090948.2-201ENST00000607363 564 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A1P02462 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
COL4A1P02462 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A1P02462 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.56□□□□□ -1.52
COL4A1P02462 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
COL4A1P02462 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A1P02462 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A1P02462 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
COL4A1P02462 AL021877.2-201ENST00000624442 10684 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.56□□□□□ -1.52
COL4A1P02462 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A1P02462 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A1P02462 RN7SKP167-201ENST00000411047 285 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 RPL23AP26-201ENST00000412728 464 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.56□□□□□ -1.52
COL4A1P02462 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.56□□□□□ -1.52
COL4A1P02462 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.56□□□□□ -1.52
COL4A1P02462 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.56□□□□□ -1.52
COL4A1P02462 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AC091153.1-201ENST00000466297 402 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AL049874.2-201ENST00000492636 288 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.56□□□□□ -1.52
COL4A1P02462 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.56□□□□□ -1.52
COL4A1P02462 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AC005899.7-201ENST00000618199 588 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 AC007546.1-201ENST00000619452 559 ntBASIC5.56□□□□□ -1.52
COL4A1P02462 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
COL4A1P02462 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A1P02462 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A1P02462 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
COL4A1P02462 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A1P02462 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
COL4A1P02462 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A1P02462 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A1P02462 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A1P02462 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.55□□□□□ -1.52
COL4A1P02462 AC017079.1-201ENST00000333650 415 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 MIR331-201ENST00000362302 94 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 RNA5SP366-201ENST00000365454 123 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A1P02462 SNORA5.1-201ENST00000384275 131 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 AL161909.1-201ENST00000397390 712 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 RN7SKP27-201ENST00000410684 333 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 AC011933.1-201ENST00000413334 321 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
COL4A1P02462 AL136231.1-201ENST00000429407 730 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 RPEP2-201ENST00000432149 701 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.55□□□□□ -1.52
COL4A1P02462 AC009963.4-201ENST00000448535 339 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 AC116533.1-201ENST00000459748 321 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 PGBD4P4-201ENST00000509673 613 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.55□□□□□ -1.52
COL4A1P02462 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A1P02462 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.55□□□□□ -1.52
COL4A1P02462 AC106785.1-201ENST00000565935 262 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A1P02462 AL161637.1-201ENST00000622380 412 ntBASIC5.55□□□□□ -1.52
COL4A1P02462 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A1P02462 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
COL4A1P02462 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.55□□□□□ -1.52
COL4A1P02462 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A1P02462 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A1P02462 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
COL4A1P02462 AL158163.1-201ENST00000603915 1649 ntBASIC5.54□□□□□ -1.52
COL4A1P02462 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL4A1P02462 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A1P02462 MIR372-201ENST00000362225 67 ntBASIC5.54□□□□□ -1.52
COL4A1P02462 RNU1-132P-201ENST00000364300 164 ntBASIC5.54□□□□□ -1.52
COL4A1P02462 AC007738.1-201ENST00000413892 348 ntBASIC5.54□□□□□ -1.52
COL4A1P02462 NUTF2P3-201ENST00000448540 384 ntBASIC5.54□□□□□ -1.52
COL4A1P02462 AC098799.3-201ENST00000506095 438 ntBASIC5.54□□□□□ -1.52
COL4A1P02462 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.54□□□□□ -1.52
COL4A1P02462 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A1P02462 AC010547.7-201ENST00000570323 333 ntBASIC5.54□□□□□ -1.52
COL4A1P02462 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A1P02462 AC130352.1-201ENST00000602979 661 ntBASIC5.54□□□□□ -1.52
COL4A1P02462 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A1P02462 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms