Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC012414.7-202ENST00000622705 1090 ntBASIC6.31□□□□□ -1.4
COL3A1P02461 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL3A1P02461 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL3A1P02461 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.31□□□□□ -1.4
COL3A1P02461 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL3A1P02461 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL3A1P02461 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
COL3A1P02461 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL3A1P02461 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
COL3A1P02461 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.31□□□□□ -1.4
COL3A1P02461 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL3A1P02461 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL3A1P02461 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL3A1P02461 AC135352.1-201ENST00000506173 1418 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 AC126755.2-208ENST00000327792 462 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 AC138969.1-213ENST00000331436 462 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 AC083799.1-201ENST00000366451 910 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 AL356967.1-201ENST00000406305 431 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.3□□□□□ -1.4
COL3A1P02461 AC140479.3-201ENST00000418944 1126 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.3□□□□□ -1.4
COL3A1P02461 AC091390.1-201ENST00000433904 331 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 RN7SL738P-201ENST00000470264 297 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 RPL5P22-201ENST00000480199 884 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.3□□□□□ -1.4
COL3A1P02461 AC010374.2-201ENST00000512933 535 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 OR8K2P-201ENST00000524645 927 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.3□□□□□ -1.4
COL3A1P02461 AL136520.1-202ENST00000555494 763 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL3A1P02461 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.3□□□□□ -1.4
COL3A1P02461 AC015912.2-201ENST00000571053 181 ntBASIC6.3□□□□□ -1.4
COL3A1P02461 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.3□□□□□ -1.4
COL3A1P02461 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL3A1P02461 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.3□□□□□ -1.4
COL3A1P02461 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL3A1P02461 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL3A1P02461 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
COL3A1P02461 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL3A1P02461 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL3A1P02461 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL3A1P02461 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL3A1P02461 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 RNU4-40P-201ENST00000364351 143 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 RPS21P8-201ENST00000413365 247 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 AC119751.6-201ENST00000416712 186 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.29□□□□□ -1.4
COL3A1P02461 E2F6P2-201ENST00000420708 748 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 EIF4HP2-201ENST00000424380 563 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 AL451139.1-201ENST00000434718 346 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.29□□□□□ -1.4
COL3A1P02461 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.29□□□□□ -1.4
COL3A1P02461 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.29□□□□□ -1.4
COL3A1P02461 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.29□□□□□ -1.4
COL3A1P02461 MTND3P4-201ENST00000453537 303 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 MTND4LP2-201ENST00000502312 285 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.29□□□□□ -1.4
COL3A1P02461 AC073358.1-201ENST00000505671 684 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 AC025674.1-201ENST00000507074 324 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.29□□□□□ -1.4
COL3A1P02461 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.29□□□□□ -1.4
COL3A1P02461 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.29□□□□□ -1.4
COL3A1P02461 CR383656.14-201ENST00000551951 406 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.29□□□□□ -1.4
COL3A1P02461 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.29□□□□□ -1.4
COL3A1P02461 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.29□□□□□ -1.4
COL3A1P02461 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.29□□□□□ -1.4
COL3A1P02461 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.29□□□□□ -1.4
COL3A1P02461 AC098483.2-201ENST00000603158 454 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 AC008782.1-201ENST00000603386 430 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 AL109659.3-201ENST00000624985 950 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.29□□□□□ -1.4
COL3A1P02461 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.29□□□□□ -1.4
COL3A1P02461 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
COL3A1P02461 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL3A1P02461 RBPJP2-201ENST00000618187 1444 ntBASIC6.29□□□□□ -1.4
COL3A1P02461 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
COL3A1P02461 MIR620-201ENST00000385232 95 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AF228730.1-201ENST00000397972 663 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.28□□□□□ -1.4
COL3A1P02461 HSPE1P27-201ENST00000430808 296 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 SETP8-201ENST00000435341 628 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AL513343.1-201ENST00000451818 792 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.28□□□□□ -1.4
COL3A1P02461 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.28□□□□□ -1.4
COL3A1P02461 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.28□□□□□ -1.4
COL3A1P02461 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.28□□□□□ -1.4
COL3A1P02461 OR8K4P-201ENST00000534608 872 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms