Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-AP01891 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-AP01891 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-AP01891 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-AP01891 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HLA-AP01891 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HLA-AP01891 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-AP01891 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-AP01891 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-AP01891 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-AP01891 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HLA-AP01891 U3.3-201ENST00000362986 216 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 MIR195-201ENST00000385194 87 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 AC093719.1-202ENST00000392735 373 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
HLA-AP01891 AC009804.1-201ENST00000400949 179 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 RN7SKP206-201ENST00000410823 293 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-AP01891 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-AP01891 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-AP01891 FHP1-201ENST00000442741 703 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-AP01891 RPS4XP1-201ENST00000482189 787 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-AP01891 STMN1P2-201ENST00000508435 439 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-AP01891 RPL7L1P4-201ENST00000513004 707 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 RNA5SP373-201ENST00000517271 95 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 AF186190.1-201ENST00000517470 480 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-AP01891 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HLA-AP01891 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-AP01891 AC087477.6-201ENST00000559595 843 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-AP01891 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-AP01891 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-AP01891 ATP5J2P6-201ENST00000565203 266 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 RPL10P14-201ENST00000565265 298 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-AP01891 AC090312.1-201ENST00000580637 348 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-AP01891 AC109309.2-201ENST00000612597 332 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 AC012414.7-202ENST00000622705 1090 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 MIR4302-201ENST00000638058 60 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 CASC19-204ENST00000641001 2055 ntBASIC4.13□□□□□ -1.75
HLA-AP01891 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-AP01891 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-AP01891 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-AP01891 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HLA-AP01891 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HLA-AP01891 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HLA-AP01891 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-AP01891 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HLA-AP01891 AC093535.2-201ENST00000624769 2326 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AC005332.5-201ENST00000591222 2919 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-AP01891 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-AP01891 AC120338.1-201ENST00000625074 1541 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-AP01891 RNU1-94P-201ENST00000362627 173 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 RNA5SP132-201ENST00000364725 118 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 RNA5SP372-201ENST00000390836 115 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AL390774.1-201ENST00000411924 246 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.12□□□□□ -1.75
HLA-AP01891 CYCSP10-201ENST00000417973 294 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-AP01891 AC079355.1-201ENST00000421770 223 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AC004448.2-201ENST00000422360 586 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-AP01891 FAM96AP1-201ENST00000430879 482 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 RPL7L1P9-201ENST00000431298 745 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-AP01891 CFL1P1-202ENST00000432948 411 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 PPIAP13-201ENST00000434706 478 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-AP01891 AC004938.1-201ENST00000438468 308 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 RPSAP41-201ENST00000439695 860 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-AP01891 RPS29P9-201ENST00000440360 171 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AL357520.1-201ENST00000441557 453 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-AP01891 CASP3P1-201ENST00000446037 609 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 RPS26P41-201ENST00000450370 284 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 HMGB1P4-201ENST00000455362 567 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-AP01891 AL133445.1-201ENST00000467051 452 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-AP01891 RN7SL817P-201ENST00000480777 288 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AC108693.1-201ENST00000496068 432 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-AP01891 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-AP01891 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-AP01891 RNU6-941P-201ENST00000516346 108 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HLA-AP01891 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HLA-AP01891 AC011270.1-201ENST00000558606 583 ntBASIC4.12□□□□□ -1.75
HLA-AP01891 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.12□□□□□ -1.75
HLA-AP01891 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-AP01891 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-AP01891 FKBP1AP1-201ENST00000594588 318 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms