Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFBP01127 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFBP01127 AC022431.1-201ENST00000450941 438 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 IGHV5-78-201ENST00000450948 295 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.16□□□□□ -1.58
PDGFBP01127 AC069277.2-201ENST00000454211 432 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 AC010618.1-201ENST00000469924 477 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 AC090058.1-201ENST00000498788 435 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.16□□□□□ -1.58
PDGFBP01127 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFBP01127 AC020910.3-201ENST00000603701 874 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 AL356218.2-201ENST00000605264 187 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.16□□□□□ -1.58
PDGFBP01127 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.16□□□□□ -1.58
PDGFBP01127 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFBP01127 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFBP01127 AC010266.2-201ENST00000564741 3255 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFBP01127 AC099654.2-201ENST00000433031 1980 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 AL022311.1-201ENST00000623726 19416 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFBP01127 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDGFBP01127 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDGFBP01127 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PDGFBP01127 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
PDGFBP01127 AL590240.1-201ENST00000334118 313 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDGFBP01127 RNA5SP447-201ENST00000363749 119 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 RNU6-819P-201ENST00000364116 107 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDGFBP01127 RN7SKP263-201ENST00000411194 309 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 ELOCP19-201ENST00000411919 318 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 RPS20P25-201ENST00000412447 352 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.15□□□□□ -1.59
PDGFBP01127 NPM1P26-201ENST00000426339 738 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 RPL23AP4-201ENST00000427757 463 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFBP01127 USP24P1-201ENST00000433802 779 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 AC005154.2-201ENST00000438110 379 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 ARL5AP3-201ENST00000439327 386 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 NPM1P39-201ENST00000449818 867 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 AC079168.1-201ENST00000458741 345 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 AC093827.1-201ENST00000480094 861 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 GLUD1P3-202ENST00000508551 200 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 SNORA70.17-201ENST00000516449 133 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.15□□□□□ -1.59
PDGFBP01127 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFBP01127 SOX5P1-201ENST00000524155 1127 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.15□□□□□ -1.59
PDGFBP01127 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.15□□□□□ -1.59
PDGFBP01127 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.15□□□□□ -1.59
PDGFBP01127 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFBP01127 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.15□□□□□ -1.59
PDGFBP01127 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFBP01127 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.15□□□□□ -1.59
PDGFBP01127 AC098935.2-201ENST00000604222 466 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFBP01127 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFBP01127 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 MIR6853-201ENST00000619642 74 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFBP01127 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFBP01127 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.15□□□□□ -1.59
PDGFBP01127 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFBP01127 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PDGFBP01127 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFBP01127 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.15□□□□□ -1.59
PDGFBP01127 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFBP01127 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PDGFBP01127 AC239868.2-201ENST00000564237 4527 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFBP01127 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
PDGFBP01127 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFBP01127 HSPA8P17-201ENST00000427029 1382 ntBASIC5.15□□□□□ -1.59
PDGFBP01127 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFBP01127 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.15□□□□□ -1.59
PDGFBP01127 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.14□□□□□ -1.59
PDGFBP01127 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFBP01127 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFBP01127 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFBP01127 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFBP01127 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFBP01127 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFBP01127 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDGFBP01127 OR4K15-201ENST00000305051 1216 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDGFBP01127 RPL11P3-201ENST00000395256 523 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 AC240504.1-201ENST00000395709 845 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 AL034403.1-201ENST00000399414 885 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
PDGFBP01127 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFBP01127 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.14□□□□□ -1.59
PDGFBP01127 MTCYBP7-201ENST00000419540 1134 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFBP01127 OR2B7P-201ENST00000429302 934 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFBP01127 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFBP01127 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFBP01127 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms