Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 UBTFL9-201ENST00000534504 1148 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1BO75841 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC091304.5-201ENST00000568969 158 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC010615.3-201ENST00000597319 394 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 AC124916.2-201ENST00000604416 224 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1BO75841 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.1□□□□□ -1.75
UPK1BO75841 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC074101.1-201ENST00000637861 241 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1BO75841 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1BO75841 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC091305.2-201ENST00000624049 1576 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1BO75841 AC107021.2-201ENST00000567714 2095 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1BO75841 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
UPK1BO75841 Y_RNA.62-201ENST00000362840 99 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1BO75841 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
UPK1BO75841 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1BO75841 GAPDHP49-201ENST00000421421 961 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1BO75841 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1BO75841 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.09□□□□□ -1.75
UPK1BO75841 FMO7P-201ENST00000436045 768 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
UPK1BO75841 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.09□□□□□ -1.75
UPK1BO75841 AL158214.1-201ENST00000444423 404 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 TCEA1P1-201ENST00000449716 880 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.09□□□□□ -1.75
UPK1BO75841 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1BO75841 AC079804.1-201ENST00000461922 436 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1BO75841 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1BO75841 GTF2F2P1-201ENST00000511083 675 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1BO75841 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1BO75841 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1BO75841 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1BO75841 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
UPK1BO75841 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1BO75841 CD24P2-201ENST00000565486 219 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1BO75841 MT1CP-201ENST00000567054 174 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.09□□□□□ -1.75
UPK1BO75841 MTND2P13-201ENST00000577438 1039 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1BO75841 AC090774.2-201ENST00000584708 322 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1BO75841 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1BO75841 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1BO75841 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 AC096553.1-201ENST00000605169 829 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 GMCL1P2-201ENST00000605230 823 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 AC023206.1-201ENST00000605824 298 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1BO75841 AC011815.3-201ENST00000624194 473 ntBASIC4.09□□□□□ -1.75
UPK1BO75841 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1BO75841 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
UPK1BO75841 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.09□□□□□ -1.76
UPK1BO75841 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
UPK1BO75841 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
UPK1BO75841 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
UPK1BO75841 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
UPK1BO75841 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
UPK1BO75841 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1BO75841 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1BO75841 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1BO75841 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1BO75841 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1BO75841 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UPK1BO75841 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1BO75841 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1BO75841 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1BO75841 MT-RNR1-201ENST00000389680 954 ntBASIC4.08□□□□□ -1.76
UPK1BO75841 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UPK1BO75841 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.08□□□□□ -1.76
UPK1BO75841 TRIM60P17-201ENST00000415181 719 ntBASIC4.08□□□□□ -1.76
UPK1BO75841 NXF4-202ENST00000416098 1465 ntBASIC4.08□□□□□ -1.76
UPK1BO75841 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.08□□□□□ -1.76
UPK1BO75841 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1BO75841 AL662874.1-201ENST00000426065 230 ntBASIC4.08□□□□□ -1.76
UPK1BO75841 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UPK1BO75841 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.08□□□□□ -1.76
UPK1BO75841 AP000936.3-201ENST00000438127 255 ntBASIC4.08□□□□□ -1.76
UPK1BO75841 GSTA7P-201ENST00000438425 448 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms