Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AP000797.2-201ENST00000475768 606 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.78□□□□□ -1.64
PRKNO60260 RPS24P16-201ENST00000497294 392 ntBASIC4.78□□□□□ -1.64
PRKNO60260 NIFKP7-201ENST00000503365 834 ntBASIC4.78□□□□□ -1.64
PRKNO60260 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRKNO60260 RN7SKP66-201ENST00000516681 231 ntBASIC4.78□□□□□ -1.64
PRKNO60260 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.78□□□□□ -1.64
PRKNO60260 SOX5P1-201ENST00000524155 1127 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.78□□□□□ -1.64
PRKNO60260 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.78□□□□□ -1.64
PRKNO60260 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.78□□□□□ -1.64
PRKNO60260 AC092490.3-201ENST00000545370 572 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.78□□□□□ -1.64
PRKNO60260 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.78□□□□□ -1.64
PRKNO60260 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PRKNO60260 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PRKNO60260 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.78□□□□□ -1.64
PRKNO60260 AC011447.4-201ENST00000587562 111 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.78□□□□□ -1.64
PRKNO60260 AC068620.3-201ENST00000602749 560 ntBASIC4.78□□□□□ -1.64
PRKNO60260 MTCO3P22-201ENST00000603219 784 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AC009163.6-201ENST00000612367 342 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AL627230.1-201ENST00000613077 211 ntBASIC4.78□□□□□ -1.64
PRKNO60260 MIR8084-201ENST00000614105 89 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AL591926.8-201ENST00000616876 211 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AC091046.2-201ENST00000620775 665 ntBASIC4.78□□□□□ -1.64
PRKNO60260 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AC090506.2-201ENST00000624521 419 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AP003485.1-201ENST00000625093 753 ntBASIC4.78□□□□□ -1.64
PRKNO60260 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.78□□□□□ -1.64
PRKNO60260 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PRKNO60260 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRKNO60260 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.78□□□□□ -1.64
PRKNO60260 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PRKNO60260 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRKNO60260 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PRKNO60260 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRKNO60260 AC004817.4-201ENST00000602396 3625 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AC007342.5-201ENST00000571340 2142 ntBASIC4.78□□□□□ -1.64
PRKNO60260 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRKNO60260 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.77□□□□□ -1.65
PRKNO60260 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PRKNO60260 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.77□□□□□ -1.65
PRKNO60260 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.77□□□□□ -1.65
PRKNO60260 SNORA74A-201ENST00000364089 198 ntBASIC4.77□□□□□ -1.65
PRKNO60260 RNU4-4P-201ENST00000364588 130 ntBASIC4.77□□□□□ -1.65
PRKNO60260 RNA5SP455-201ENST00000365190 119 ntBASIC4.77□□□□□ -1.65
PRKNO60260 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
PRKNO60260 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 RNU6-1000P-201ENST00000391066 106 ntBASIC4.77□□□□□ -1.65
PRKNO60260 GSTA12P-201ENST00000402398 508 ntBASIC4.77□□□□□ -1.65
PRKNO60260 RN7SKP114-201ENST00000410327 279 ntBASIC4.77□□□□□ -1.65
PRKNO60260 AL445213.1-201ENST00000412589 747 ntBASIC4.77□□□□□ -1.65
PRKNO60260 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 AC093162.1-201ENST00000419682 124 ntBASIC4.77□□□□□ -1.65
PRKNO60260 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 NPM1P22-201ENST00000427761 952 ntBASIC4.77□□□□□ -1.65
PRKNO60260 AL161722.2-201ENST00000434731 981 ntBASIC4.77□□□□□ -1.65
PRKNO60260 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 RPL34P20-201ENST00000442771 351 ntBASIC4.77□□□□□ -1.65
PRKNO60260 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.77□□□□□ -1.65
PRKNO60260 AC097484.1-201ENST00000471148 389 ntBASIC4.77□□□□□ -1.65
PRKNO60260 RN7SL826P-201ENST00000479724 288 ntBASIC4.77□□□□□ -1.65
PRKNO60260 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.77□□□□□ -1.65
PRKNO60260 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 AC109462.1-201ENST00000491087 368 ntBASIC4.77□□□□□ -1.65
PRKNO60260 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.77□□□□□ -1.65
PRKNO60260 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.77□□□□□ -1.65
PRKNO60260 AC004980.4-201ENST00000513375 203 ntBASIC4.77□□□□□ -1.65
PRKNO60260 MTCO3P27-201ENST00000514397 196 ntBASIC4.77□□□□□ -1.65
PRKNO60260 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.77□□□□□ -1.65
PRKNO60260 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 OR8X1P-201ENST00000534542 869 ntBASIC4.77□□□□□ -1.65
PRKNO60260 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 CD24P2-201ENST00000565486 219 ntBASIC4.77□□□□□ -1.65
PRKNO60260 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.77□□□□□ -1.65
PRKNO60260 AC037198.3-201ENST00000616754 526 ntBASIC4.77□□□□□ -1.65
PRKNO60260 AC068880.4-201ENST00000623082 495 ntBASIC4.77□□□□□ -1.65
PRKNO60260 AC004808.1-201ENST00000627671 721 ntBASIC4.77□□□□□ -1.65
PRKNO60260 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 AC099654.8-201ENST00000637757 681 ntBASIC4.77□□□□□ -1.65
PRKNO60260 AC092111.2-201ENST00000611627 1414 ntBASIC4.77□□□□□ -1.65
PRKNO60260 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PRKNO60260 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms