Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 AC090425.2-201ENST00000608818 501 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AC008121.2-201ENST00000614647 523 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AC127024.6-201ENST00000621598 424 ntBASIC5.53□□□□□ -1.52
PROM1O43490 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.53□□□□□ -1.52
PROM1O43490 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PROM1O43490 RBPJP2-201ENST00000618187 1444 ntBASIC5.53□□□□□ -1.52
PROM1O43490 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PROM1O43490 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PROM1O43490 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.52□□□□□ -1.53
PROM1O43490 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
PROM1O43490 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 AC091305.2-201ENST00000624049 1576 ntBASIC5.52□□□□□ -1.53
PROM1O43490 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PROM1O43490 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.52□□□□□ -1.53
PROM1O43490 SUGT1P2-201ENST00000379452 992 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.52□□□□□ -1.53
PROM1O43490 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 MCTS2P-201ENST00000394552 546 ntBASIC5.52□□□□□ -1.53
PROM1O43490 ADAM24P-201ENST00000398655 2101 ntBASIC5.52□□□□□ -1.53
PROM1O43490 PEX12P1-201ENST00000400284 1048 ntBASIC5.52□□□□□ -1.53
PROM1O43490 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.52□□□□□ -1.53
PROM1O43490 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 AC093084.1-201ENST00000424233 687 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.52□□□□□ -1.53
PROM1O43490 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.52□□□□□ -1.53
PROM1O43490 AC005189.1-201ENST00000431286 310 ntBASIC5.52□□□□□ -1.53
PROM1O43490 DEFA9P-201ENST00000433042 285 ntBASIC5.52□□□□□ -1.53
PROM1O43490 CLUHP1-201ENST00000435012 1190 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.52□□□□□ -1.53
PROM1O43490 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.52□□□□□ -1.53
PROM1O43490 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.52□□□□□ -1.53
PROM1O43490 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.52□□□□□ -1.53
PROM1O43490 FRG2FP-204ENST00000453982 852 ntBASIC5.52□□□□□ -1.53
PROM1O43490 RPS6P2-201ENST00000454208 705 ntBASIC5.52□□□□□ -1.53
PROM1O43490 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.52□□□□□ -1.53
PROM1O43490 RPL7P32-201ENST00000457119 744 ntBASIC5.52□□□□□ -1.53
PROM1O43490 USP9YP25-201ENST00000457708 443 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AC110749.1-201ENST00000462007 357 ntBASIC5.52□□□□□ -1.53
PROM1O43490 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 AC007998.1-201ENST00000474156 672 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AC006539.1-201ENST00000481419 501 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AC126121.1-201ENST00000482313 553 ntBASIC5.52□□□□□ -1.53
PROM1O43490 RN7SL57P-201ENST00000493687 290 ntBASIC5.52□□□□□ -1.53
PROM1O43490 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 AC074087.1-201ENST00000512059 724 ntBASIC5.52□□□□□ -1.53
PROM1O43490 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 SNORD46.2-201ENST00000516021 102 ntBASIC5.52□□□□□ -1.53
PROM1O43490 RN7SKP141-201ENST00000516167 338 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.52□□□□□ -1.53
PROM1O43490 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.52□□□□□ -1.53
PROM1O43490 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.52□□□□□ -1.53
PROM1O43490 OR8I1P-201ENST00000529291 931 ntBASIC5.52□□□□□ -1.53
PROM1O43490 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.52□□□□□ -1.53
PROM1O43490 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.52□□□□□ -1.53
PROM1O43490 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.52□□□□□ -1.53
PROM1O43490 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.52□□□□□ -1.53
PROM1O43490 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.52□□□□□ -1.53
PROM1O43490 MTCO2P22-201ENST00000603246 681 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AC121247.2-201ENST00000604776 136 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AC025175.1-201ENST00000606482 759 ntBASIC5.52□□□□□ -1.53
PROM1O43490 VIS1.1-201ENST00000610517 203 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AL512624.1-201ENST00000613638 469 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AC010975.3-201ENST00000618727 978 ntBASIC5.52□□□□□ -1.53
PROM1O43490 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.52□□□□□ -1.53
PROM1O43490 AC092608.3-201ENST00000625017 386 ntBASIC5.52□□□□□ -1.53
PROM1O43490 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
PROM1O43490 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PROM1O43490 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.52□□□□□ -1.53
PROM1O43490 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms