Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MIR4675-201ENST00000577898 77 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 MIR4505-201ENST00000582238 73 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 AC015802.2-201ENST00000589690 189 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDH17O14917 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 AC104695.2-201ENST00000605056 775 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDH17O14917 RNU4-5P-201ENST00000607255 135 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH17O14917 AC140725.3-201ENST00000616193 880 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 AL035461.2-201ENST00000619201 524 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH17O14917 AC004232.3-201ENST00000622977 525 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 AC024595.1-201ENST00000623088 387 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 CU639417.4-201ENST00000623928 207 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH17O14917 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH17O14917 MFSD8-239ENST00000641590 2479 ntBASIC5.41□□□□□ -1.54
PCDH17O14917 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH17O14917 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PCDH17O14917 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCDH17O14917 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PCDH17O14917 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH17O14917 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH17O14917 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH17O14917 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDH17O14917 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH17O14917 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH17O14917 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH17O14917 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH17O14917 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
PCDH17O14917 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PCDH17O14917 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH17O14917 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH17O14917 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDH17O14917 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDH17O14917 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH17O14917 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDH17O14917 RNA5SP394-201ENST00000364216 119 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 RNA5SP132-201ENST00000364725 118 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 HMGB1P20-201ENST00000402555 677 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 RN7SKP279-201ENST00000411383 298 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 AC092638.1-201ENST00000411966 1275 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 MTND4P3-201ENST00000417829 541 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH17O14917 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH17O14917 VTI1BP4-201ENST00000427516 527 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 MTATP6P17-201ENST00000431030 672 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 PTGES3P1-201ENST00000439531 483 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 AL035551.1-201ENST00000446931 348 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 EIF2S2P2-201ENST00000447161 982 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 RPL31P44-201ENST00000447680 377 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 AL050341.1-201ENST00000447743 313 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 AC093166.4-201ENST00000457867 318 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH17O14917 AL157777.1-201ENST00000468100 304 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH17O14917 AC087672.1-201ENST00000479876 766 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 RPS3AP6-201ENST00000484430 795 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 RN7SL466P-201ENST00000497546 295 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 AC020699.1-201ENST00000505161 445 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH17O14917 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDH17O14917 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH17O14917 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH17O14917 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH17O14917 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH17O14917 EIF4A2P5-201ENST00000529914 499 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH17O14917 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH17O14917 AL049872.1-201ENST00000556323 322 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDH17O14917 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH17O14917 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH17O14917 AC019322.1-201ENST00000571869 389 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDH17O14917 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH17O14917 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH17O14917 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH17O14917 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH17O14917 BNIP3P32-201ENST00000600015 554 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 AC005377.1-201ENST00000605126 456 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 SDR42E1P1-201ENST00000611327 477 ntBASIC5.4□□□□□ -1.54
PCDH17O14917 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH17O14917 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH17O14917 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH17O14917 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH17O14917 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
PCDH17O14917 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
PCDH17O14917 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.4□□□□□ -1.55
PCDH17O14917 DDX18P4-201ENST00000511690 1966 ntBASIC5.4□□□□□ -1.55
PCDH17O14917 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH17O14917 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH17O14917 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH17O14917 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.39□□□□□ -1.55
PCDH17O14917 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH17O14917 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH17O14917 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
PCDH17O14917 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH17O14917 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms