Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 Y_RNA.719-201ENST00000517156 106 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 OR5AN2P-201ENST00000534535 896 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 TDGP1-201ENST00000543961 1229 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 PYM1-205ENST00000547925 499 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 HSPE1P2-201ENST00000554777 306 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC025283.1-201ENST00000572039 734 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC022146.1-201ENST00000595307 847 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 ELOCP34-201ENST00000604436 327 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AL034374.2-201ENST00000605281 548 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AL008582.1-201ENST00000609612 442 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC007204.2-201ENST00000615022 616 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC245014.3-201ENST00000618589 347 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 MIR193BHG-214ENST00000641765 509 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC100871.1-201ENST00000507871 1456 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 AC092079.1-201ENST00000558620 1985 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 RAD17P1-201ENST00000418130 2042 ntBASIC2.58□□□□□ -2
CHKB-CPT1BH3BT56 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 RPSAP44-201ENST00000406712 884 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AL353133.1-201ENST00000407695 401 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 VN1R8P-201ENST00000407739 893 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 SNORA11D-201ENST00000408548 128 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 SNORA11E-201ENST00000408778 128 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 OR2AM1P-201ENST00000422137 422 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 RGS17P1-201ENST00000423358 553 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 EI24P4-201ENST00000423683 1078 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC073052.1-201ENST00000440417 714 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 TXNP5-201ENST00000441043 315 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 EIF4A1P6-201ENST00000448133 1210 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC005077.1-201ENST00000449226 375 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 CLIC4P1-201ENST00000453177 535 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 RN7SL443P-201ENST00000464331 290 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC018635.1-201ENST00000468292 1030 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 SSR3-206ENST00000476217 807 ntTSL 3 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC117500.1-201ENST00000497352 755 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 RPL7L1P7-201ENST00000509986 724 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC026688.1-201ENST00000520639 1168 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AP003041.2-201ENST00000525666 1180 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 HMGN2P36-201ENST00000529541 409 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 PCNAP4-201ENST00000532690 730 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 RN7SL426P-201ENST00000579106 295 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC060766.1-201ENST00000590824 627 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 PRR13P3-201ENST00000603578 376 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 Z82195.1-201ENST00000604558 398 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC087783.2-201ENST00000605070 562 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC010200.2-201ENST00000605098 235 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AL031601.1-201ENST00000605702 394 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC103710.3-201ENST00000608157 948 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AL391261.4-201ENST00000616012 481 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 AC019206.1-201ENST00000621938 425 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 RPS4XP5-202ENST00000449995 1334 ntBASIC2.57□□□□□ -2
CHKB-CPT1BH3BT56 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms