Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AL136131.3-201ENST00000607600 188 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AP000238.1-201ENST00000608759 426 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC006924.1-201ENST00000610750 559 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 MIR6809-201ENST00000612189 116 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC024255.1-201ENST00000614376 102 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AL136228.1-201ENST00000622221 319 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC026422.1-201ENST00000623961 452 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC016717.3-201ENST00000624730 554 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AL355488.2-201ENST00000609909 2850 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC010266.2-201ENST00000564741 3255 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 OR9K1P-202ENST00000641111 3217 ntBASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHGA3Q9Y5H0 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 SHQ1P1-201ENST00000437111 1544 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 RNU1-150P-201ENST00000362491 162 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 RNA5SP478-201ENST00000364657 115 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AL121835.1-201ENST00000404250 354 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 SNORA11B-201ENST00000408175 129 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 RN7SKP59-201ENST00000410520 314 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 RPL12P12-201ENST00000424633 501 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 NDUFS5P5-201ENST00000437256 321 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AL512605.1-202ENST00000441919 381 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 MTND2P22-201ENST00000444325 1033 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AL359955.2-201ENST00000445380 353 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 MYO5BP2-201ENST00000449815 1277 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AP006222.1-205ENST00000450734 457 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 MRPL42P4-201ENST00000453267 443 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 USP9YP25-201ENST00000457708 443 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 RPL35AP19-201ENST00000469425 329 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AL035404.1-201ENST00000497982 568 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AC090058.1-201ENST00000498788 435 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 IGJP1-201ENST00000522682 475 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 OR8A2P-201ENST00000528631 952 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AP001317.1-201ENST00000531194 960 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 COX6CP7-201ENST00000597056 208 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AC013444.2-201ENST00000603317 787 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 RNF6P1-201ENST00000444889 1784 ntBASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA3Q9Y5H0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.84□□□□□ -1.48
PCDHGA3Q9Y5H0 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
PCDHGA3Q9Y5H0 AF287957.1-201ENST00000607368 1595 ntBASIC5.84□□□□□ -1.48
PCDHGA3Q9Y5H0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
PCDHGA3Q9Y5H0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
PCDHGA3Q9Y5H0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHGA3Q9Y5H0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.84□□□□□ -1.48
PCDHGA3Q9Y5H0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA3Q9Y5H0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHGA3Q9Y5H0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHGA3Q9Y5H0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHGA3Q9Y5H0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHGA3Q9Y5H0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA3Q9Y5H0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms