Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC009229.4-201ENST00000623854 1947 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 OR52B3P-201ENST00000314715 928 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 RNA5SP46-201ENST00000362370 120 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 RNA5SP335-201ENST00000363817 110 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 SNORA66-201ENST00000384792 133 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AL590806.1-201ENST00000415818 853 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC093155.2-201ENST00000420734 937 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 RGS17P1-201ENST00000423358 553 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 EI24P4-201ENST00000423683 1078 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 RPS26P2-201ENST00000440331 348 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AL450023.3-201ENST00000440592 271 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 ELOCP10-201ENST00000440624 327 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 MRPL48P1-201ENST00000445390 636 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 OTX2P1-201ENST00000450956 354 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 RN7SL51P-201ENST00000468230 285 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 RN7SL799P-201ENST00000475891 298 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 DEFB109F-201ENST00000491870 277 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 RPS4XP18-201ENST00000495480 763 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC147055.1-201ENST00000509261 750 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 RPL10P14-201ENST00000565265 298 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 ELOCP34-201ENST00000604436 327 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC116447.1-201ENST00000613153 453 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 RPSAP73-201ENST00000614820 330 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AC135068.12-201ENST00000637370 931 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 AL034370.1-201ENST00000397254 1590 ntBASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RCL1Q9Y2P8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 MAPK10-303ENST00000641324 3959 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 RNU1-83P-201ENST00000363426 164 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 RN7SKP113-201ENST00000363891 295 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 RNA5SP234-201ENST00000363916 119 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 BMS1P17-202ENST00000416720 316 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC092570.3-201ENST00000420113 693 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AL158073.1-201ENST00000426848 1104 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 MTCO1P45-201ENST00000431457 267 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 RPS27P18-201ENST00000431701 247 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC092162.1-201ENST00000432828 434 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 RPL7AP52-201ENST00000458096 790 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC104629.2-201ENST00000468627 598 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC094085.1-201ENST00000468914 584 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 RPEP1-201ENST00000504507 658 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC138866.2-201ENST00000508650 584 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC005363.1-201ENST00000530779 351 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC125612.1-201ENST00000547580 377 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC079600.1-201ENST00000550326 297 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC068714.1-201ENST00000559623 800 ntBASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.05□□□□□ -1.76
RCL1Q9Y2P8 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms