Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPIPA1Q9UND3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 RN7SKP114-201ENST00000410327 279 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 DDX39BP1-205ENST00000422507 192 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 UBE2V2P3-201ENST00000433562 437 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 RPL5P25-201ENST00000441148 775 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AL591623.2-201ENST00000449978 222 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 PRPF38AP1-201ENST00000451976 933 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC108161.1-201ENST00000461060 402 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 RN7SL244P-201ENST00000493405 297 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC105233.1-201ENST00000498840 781 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 MYL12BP2-201ENST00000503948 512 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AK4P6-201ENST00000505168 528 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC027369.5-201ENST00000533838 755 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC018552.1-201ENST00000562099 811 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC127024.5-201ENST00000580085 462 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 MIR4691-201ENST00000583764 85 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 AC087283.1-201ENST00000604029 1074 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA1Q9UND3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 AC006210.2-201ENST00000367074 1545 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 RNU4-23P-201ENST00000362839 140 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 VDAC2P1-201ENST00000399358 958 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 CHEK2P3-201ENST00000416118 248 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 OR2AM1P-201ENST00000422137 422 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 AL591363.1-201ENST00000450091 483 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 RPL7P16-201ENST00000479738 738 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 AC008147.3-201ENST00000548666 354 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 MIR4675-201ENST00000577898 77 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 AC008814.1-201ENST00000603797 406 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 AC073575.2-201ENST00000614212 627 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms