Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 AL137918.1-201ENST00000624542 1922 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 OR51H2P-202ENST00000641424 3046 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 AC093297.3-201ENST00000607056 2517 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 RNA5SP388-201ENST00000362584 119 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 RN7SKP263-201ENST00000411194 309 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 TMSB10P2-201ENST00000416049 131 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 EIF4HP2-201ENST00000424380 563 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 TRGV7-201ENST00000427089 353 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 ACTR3P2-201ENST00000439585 1257 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 RHEBP2-201ENST00000450289 600 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 AL109766.1-201ENST00000555080 552 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 AC093765.1-201ENST00000603758 881 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 AL049536.1-201ENST00000625043 744 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN11AQ9UI33 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.99□□□□□ -1.45
SCN11AQ9UI33 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 NFYAP1-201ENST00000431953 972 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 GLRXP2-201ENST00000555594 321 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AL445487.1-201ENST00000415694 1580 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 MAPK10-328ENST00000641553 4009 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 OR6C69P-201ENST00000394268 893 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AL583835.1-201ENST00000399570 407 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 RAD23BP1-201ENST00000421404 1227 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 FTH1P16-201ENST00000435241 552 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AC022034.3-201ENST00000471393 478 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 FKBP1BP1-201ENST00000553366 325 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 VN1R85P-201ENST00000601587 426 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AL591034.3-201ENST00000605511 685 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AC073137.1-201ENST00000605636 634 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 MIR6716-201ENST00000613413 80 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 FRG1EP-201ENST00000634469 770 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN11AQ9UI33 AC140134.1-201ENST00000511830 3544 ntBASIC5.98□□□□□ -1.45
SCN11AQ9UI33 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 AL590762.2-201ENST00000395798 571 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 ST13P16-201ENST00000401760 781 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 Z74021.1-201ENST00000423610 407 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.97□□□□□ -1.45
SCN11AQ9UI33 RPL35AP21-201ENST00000437667 333 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 AC044797.1-201ENST00000445744 679 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 BTF3P6-201ENST00000448054 499 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 AL162591.2-201ENST00000449634 317 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 PPM1AP1-201ENST00000502740 1135 ntBASIC5.97□□□□□ -1.45
SCN11AQ9UI33 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms