Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC015914.2-201ENST00000618167 288 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 AC073342.3-201ENST00000624211 193 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 BTBD10P1-201ENST00000549824 1352 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC133552.1-201ENST00000569988 4007 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 RPS29P9-201ENST00000440360 171 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 TXNP5-201ENST00000441043 315 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 BTF3P6-201ENST00000448054 499 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC063943.1-201ENST00000465434 453 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC093890.1-201ENST00000502554 540 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 GAPDHP56-201ENST00000506031 988 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC022616.2-201ENST00000523185 300 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 NDUFB4P11-201ENST00000560510 395 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 BGLT3-201ENST00000564523 994 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC234775.3-201ENST00000564612 656 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AL390726.5-202ENST00000564800 256 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC005229.3-201ENST00000603438 323 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 AC083843.2-201ENST00000568248 6253 ntBASIC5.84□□□□□ -1.47
CLIP2Q9UDT6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CLIP2Q9UDT6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CLIP2Q9UDT6 AC011447.7-201ENST00000624228 1590 ntBASIC5.84□□□□□ -1.48
CLIP2Q9UDT6 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 AC027228.2-201ENST00000567141 2154 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 RNU4-44P-201ENST00000363050 141 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 AL136116.2-201ENST00000404020 785 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 NFYAP1-201ENST00000431953 972 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 RPL35AP21-201ENST00000437667 333 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 ARAFP2-201ENST00000440565 559 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 AL450023.3-201ENST00000440592 271 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 AL589765.3-201ENST00000446084 462 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 RN7SL441P-201ENST00000492388 296 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 HMGB3P16-201ENST00000508037 287 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 AC099654.2-201ENST00000433031 1980 ntBASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLIP2Q9UDT6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 AC245100.2-201ENST00000454544 1679 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 ZNF652P1-201ENST00000442420 1309 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 SAMMSON-226ENST00000642089 1582 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 RNA5SP191-201ENST00000362585 102 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 UBBP2-201ENST00000376781 231 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 RNA5SP87-201ENST00000384155 118 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 HMGB3P7-201ENST00000400214 611 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 U3.32-201ENST00000408116 212 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms