Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 CIR1P2-201ENST00000514821 1342 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 RNA5SP507-201ENST00000363603 121 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 ARL4AP5-201ENST00000404372 599 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AL080315.1-201ENST00000406055 466 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 RNU4-34P-201ENST00000410431 124 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 RPS27P18-201ENST00000431701 247 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 CEACAMP7-201ENST00000444105 496 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AC104651.2-201ENST00000447549 528 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 TRY2P-201ENST00000448860 689 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 RN7SL629P-201ENST00000489622 285 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 RN7SL591P-201ENST00000496150 292 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AC011411.1-201ENST00000509592 876 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AC147055.3-201ENST00000510547 851 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 MORF4L1P3-201ENST00000525966 950 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 RN7SL802P-201ENST00000577858 299 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 MIR5699-201ENST00000578903 90 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AC011487.3-201ENST00000593607 453 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AC087763.1-201ENST00000603391 286 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AC011453.2-201ENST00000603737 729 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 IMMP1LP1-201ENST00000605170 488 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AL512624.1-201ENST00000613638 469 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 NAMPTP1-201ENST00000440465 2514 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AC097461.1-201ENST00000568928 2821 ntBASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
VPS29Q9UBQ0 AL136164.3-201ENST00000624429 3978 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 RNU4-44P-201ENST00000363050 141 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 U3.30-201ENST00000391308 210 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 TDGF1P1-201ENST00000445734 527 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 snoU13.20-201ENST00000459180 104 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 AC004815.1-201ENST00000484185 331 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 AC093890.1-201ENST00000502554 540 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 RNU1-6P-201ENST00000516290 144 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 GCSHP4-201ENST00000538792 439 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 AC008033.2-201ENST00000542626 177 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 AC133555.2-201ENST00000550213 292 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 HMGN2P6-201ENST00000551091 273 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 AC079075.1-201ENST00000559543 878 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 NCLP2-201ENST00000416078 1462 ntBASIC4.56□□□□□ -1.68
VPS29Q9UBQ0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AC092111.2-201ENST00000611627 1414 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 BTBD10P1-201ENST00000549824 1352 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AC021242.1-201ENST00000507315 2035 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 RNA5SP123-201ENST00000363244 119 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AL590762.2-201ENST00000395798 571 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 SNORA79B-201ENST00000410557 148 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 RPL23AP27-201ENST00000415161 451 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AL034379.1-201ENST00000423216 253 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 RPL7P57-201ENST00000423238 740 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AL645608.4-201ENST00000423619 154 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 RBMY2QP-201ENST00000429799 1147 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AURKAPS2-201ENST00000454983 333 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 RPS5P7-201ENST00000456664 608 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AC104971.1-201ENST00000495117 578 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AL358913.1-201ENST00000554342 121 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms