Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 SRRM1P3-201ENST00000426911 2678 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 MRE11P1-201ENST00000464884 2127 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC083843.2-201ENST00000568248 6253 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 SNORD116-2-201ENST00000384274 95 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 SNORD116-6-201ENST00000384711 96 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 RNA5SP91-201ENST00000390902 119 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 U3.25-201ENST00000391209 220 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AL391422.1-201ENST00000402155 436 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AL158825.1-201ENST00000414735 521 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 RPL22P18-201ENST00000417197 377 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AL121776.1-201ENST00000429337 372 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 NPM1P18-201ENST00000434232 732 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 RPL5P25-201ENST00000441148 775 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 MTCYBP21-201ENST00000443300 1113 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 EEF1B2P6-201ENST00000445713 673 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC073909.1-201ENST00000447112 999 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 RPL21P47-201ENST00000483696 477 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AP000563.1-201ENST00000490865 758 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC023824.3-201ENST00000569003 562 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC104695.2-201ENST00000605056 775 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC008115.3-201ENST00000614874 549 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC231759.1-201ENST00000616455 597 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AL121890.2-201ENST00000617644 465 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
DKK3Q9UBP4 AL355578.1-201ENST00000607405 1328 ntBASIC5.72□□□□□ -1.49
DKK3Q9UBP4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
DKK3Q9UBP4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
DKK3Q9UBP4 MTND4P8-201ENST00000514997 1362 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 RNU6-252P-201ENST00000363232 107 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 RNU6-481P-201ENST00000384194 107 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AP002784.2-201ENST00000397300 549 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 RNGTTP1-201ENST00000420965 728 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 OR10R1P-201ENST00000441524 1141 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 PDCL3P4-201ENST00000489621 720 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC023424.1-201ENST00000496058 459 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 MTND4LP2-201ENST00000502312 285 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC010374.1-201ENST00000503762 1237 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC147055.3-201ENST00000510547 851 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AP000916.1-201ENST00000533869 835 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 HSPE1P2-201ENST00000554777 306 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AL121839.1-201ENST00000556233 1185 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AGGF1P7-201ENST00000562369 913 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms