Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
VAPAQ9P0L0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AC104118.1-201ENST00000607625 1589 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 RNA5SP428-201ENST00000365129 132 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 RNA5SP455-201ENST00000365190 119 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 RNU6-1263P-201ENST00000384601 106 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL080315.1-201ENST00000406055 466 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL138899.2-201ENST00000439139 499 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL137845.2-201ENST00000444292 988 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 FAR2P1-206ENST00000449736 709 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL645937.3-201ENST00000453647 936 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 DEFB109F-201ENST00000491870 277 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 SNRPCP2-201ENST00000504370 475 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 MRPS33P2-201ENST00000507850 322 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 IGKV2-18-201ENST00000522607 343 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AC022882.1-201ENST00000532142 501 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AP000919.1-201ENST00000582850 985 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 COX6CP4-201ENST00000605798 228 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL512329.2-201ENST00000607350 548 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL353662.3-201ENST00000625131 237 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AL606537.1-201ENST00000607258 2011 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 AC005332.5-201ENST00000591222 2919 ntBASIC4.54□□□□□ -1.68
VAPAQ9P0L0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.54□□□□□ -1.68
VAPAQ9P0L0 CASC19-204ENST00000641001 2055 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 THAP12P4-201ENST00000528321 2266 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 SMG1P6-201ENST00000532337 2930 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AL021331.1-201ENST00000402817 582 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 U3.36-201ENST00000408418 213 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 RN7SKP199-201ENST00000410325 305 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 RPS17P8-201ENST00000434525 335 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AC104651.2-201ENST00000447549 528 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 RPL23AP56-201ENST00000460778 453 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 RN7SL319P-201ENST00000480656 221 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AC072052.1-201ENST00000496556 306 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 RNA5SP360-201ENST00000516555 118 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AL121839.1-201ENST00000556233 1185 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AC234775.3-201ENST00000564612 656 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.53□□□□□ -1.68
VAPAQ9P0L0 MIR4675-201ENST00000577898 77 ntBASIC4.53□□□□□ -1.68
VAPAQ9P0L0 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms