Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC107027.3-201ENST00000565095 3473 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 OR9K1P-201ENST00000326513 941 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 RN7SKP114-201ENST00000410327 279 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 BX510359.3-201ENST00000422168 306 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AL355433.1-201ENST00000422804 300 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC023141.6-201ENST00000429418 337 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 HMGB1P5-202ENST00000451497 985 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 MTND2P30-201ENST00000456663 382 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 RPL7AP52-201ENST00000458096 790 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC107398.1-201ENST00000486904 505 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 RPS27AP16-201ENST00000492222 470 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 SNRPCP2-201ENST00000504370 475 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC004923.2-201ENST00000529649 369 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC022884.3-201ENST00000579571 248 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 RN7SL753P-201ENST00000581238 290 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AL671309.1-201ENST00000603750 544 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 SUMO2P15-201ENST00000604285 278 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC018695.5-201ENST00000605872 315 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AL391834.1-201ENST00000609609 560 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC099494.2-201ENST00000623371 978 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC090617.9-201ENST00000623751 147 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 MAPK10-338ENST00000641647 3362 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC009313.2-201ENST00000417893 1941 ntBASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S4Q9NUP1 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 AL590763.1-201ENST00000398297 1545 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 RNU6-185P-201ENST00000384421 107 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 MIR223-201ENST00000385204 110 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 RNU6-244P-201ENST00000391028 104 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 AC233289.1-201ENST00000403700 508 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 AL591363.1-201ENST00000450091 483 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 AURKAPS1-201ENST00000451805 1212 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 RPL23AP23-201ENST00000452590 471 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 RN7SL443P-201ENST00000464331 290 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 AC093890.1-201ENST00000502554 540 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 RNA5SP92-201ENST00000516437 110 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 AC073137.1-201ENST00000605636 634 ntBASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms