Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CISHQ9NSE2 AC133552.1-201ENST00000569988 4007 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CISHQ9NSE2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CISHQ9NSE2 AP000542.2-201ENST00000623199 6179 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 AC012078.1-201ENST00000405035 1646 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
CISHQ9NSE2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CISHQ9NSE2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5□□□□□ -1.61
CISHQ9NSE2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CISHQ9NSE2 HSPA8P14-201ENST00000552265 1805 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CISHQ9NSE2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CISHQ9NSE2 OR9K1P-202ENST00000641111 3217 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 AL672167.1-205ENST00000641112 3080 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 RNU1-83P-201ENST00000363426 164 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CISHQ9NSE2 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CISHQ9NSE2 RN7SKP267-201ENST00000410381 285 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5□□□□□ -1.61
CISHQ9NSE2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5□□□□□ -1.61
CISHQ9NSE2 ATP5A1P7-201ENST00000453978 1279 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 RPL36AP41-201ENST00000493820 306 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5□□□□□ -1.61
CISHQ9NSE2 AL671862.1-201ENST00000515851 349 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 SNORA70.11-201ENST00000515987 138 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 SNORA70.13-201ENST00000516116 138 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 AC008147.3-201ENST00000548666 354 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5□□□□□ -1.61
CISHQ9NSE2 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5□□□□□ -1.61
CISHQ9NSE2 MIR4443-201ENST00000585052 53 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5□□□□□ -1.61
CISHQ9NSE2 AC073091.2-201ENST00000603205 907 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 AC100827.5-201ENST00000615883 426 ntBASIC5□□□□□ -1.61
CISHQ9NSE2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5□□□□□ -1.61
CISHQ9NSE2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5□□□□□ -1.61
CISHQ9NSE2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5□□□□□ -1.61
CISHQ9NSE2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CISHQ9NSE2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CISHQ9NSE2 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5□□□□□ -1.61
CISHQ9NSE2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CISHQ9NSE2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5□□□□□ -1.61
CISHQ9NSE2 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5□□□□□ -1.61
CISHQ9NSE2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CISHQ9NSE2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CISHQ9NSE2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CISHQ9NSE2 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CISHQ9NSE2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 AL139128.1-201ENST00000413921 941 ntBASIC4.99□□□□□ -1.61
CISHQ9NSE2 ATG4AP1-201ENST00000416893 538 ntBASIC4.99□□□□□ -1.61
CISHQ9NSE2 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CISHQ9NSE2 AC006967.1-201ENST00000467608 589 ntBASIC4.99□□□□□ -1.61
CISHQ9NSE2 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 IGKV1-32-201ENST00000519290 311 ntBASIC4.99□□□□□ -1.61
CISHQ9NSE2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 OR5M2P-201ENST00000529003 936 ntBASIC4.99□□□□□ -1.61
CISHQ9NSE2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 AP000619.2-201ENST00000546014 969 ntBASIC4.99□□□□□ -1.61
CISHQ9NSE2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 MIR4270-201ENST00000581799 70 ntBASIC4.99□□□□□ -1.61
CISHQ9NSE2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 AL359757.1-201ENST00000623176 255 ntBASIC4.99□□□□□ -1.61
CISHQ9NSE2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CISHQ9NSE2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.99□□□□□ -1.61
CISHQ9NSE2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CISHQ9NSE2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 MIR298-201ENST00000401212 88 ntBASIC4.98□□□□□ -1.61
CISHQ9NSE2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 AL772161.1-201ENST00000439130 476 ntBASIC4.98□□□□□ -1.61
CISHQ9NSE2 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 AL031584.1-201ENST00000447169 754 ntBASIC4.98□□□□□ -1.61
CISHQ9NSE2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 RPS26P24-201ENST00000497656 331 ntBASIC4.98□□□□□ -1.61
CISHQ9NSE2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 MIR4472-2-201ENST00000582069 67 ntBASIC4.98□□□□□ -1.61
CISHQ9NSE2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 AC130352.1-201ENST00000602979 661 ntBASIC4.98□□□□□ -1.61
CISHQ9NSE2 LSM1P2-201ENST00000604911 322 ntBASIC4.98□□□□□ -1.61
CISHQ9NSE2 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms